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Report for CCDS73694.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
73694.1 Public Homo sapiens 15 NIPA2 24 110 108 CCDS HistoryNCBI Gene:81614Re-query CCDS DB by CCDS ID:73694.1Re-query CCDS DB by GeneID:81614See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 73694.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000359727.8 ENSP00000352762.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000359727.8Link to Ensembl Protein Viewer:ENSP00000352762.4Re-query CCDS DB by Nucleotide ID:ENST00000359727Re-query CCDS DB by Protein ID:ENSP00000352762
Original member Current member EBI ENST00000398014.7 ENSP00000381096.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000398014.7Link to Ensembl Protein Viewer:ENSP00000381096.3Re-query CCDS DB by Nucleotide ID:ENST00000398014Re-query CCDS DB by Protein ID:ENSP00000381096
Original member Current member EBI ENST00000539711.2 ENSP00000437746.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000539711.2Link to Ensembl Protein Viewer:ENSP00000437746.2Re-query CCDS DB by Nucleotide ID:ENST00000539711Re-query CCDS DB by Protein ID:ENSP00000437746
Original member Current member NCBI NM_001008894.3 NP_001008894.1 Accepted alive Link to Nucleotide Sequence:NM_001008894.3Link to Protein Sequence:NP_001008894.1Re-query CCDS DB by Nucleotide ID:NM_001008894Re-query CCDS DB by Protein ID:NP_001008894Link to BLAST:NP_001008894.1
Original member Current member NCBI NM_001184888.2 NP_001171817.1 Accepted alive Link to Nucleotide Sequence:NM_001184888.2Link to Protein Sequence:NP_001171817.1Re-query CCDS DB by Nucleotide ID:NM_001184888Re-query CCDS DB by Protein ID:NP_001171817Link to BLAST:NP_001171817.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001008894.1 341 Q8N8Q9-2 341 100% 0 0
NP_001171817.1 341 Q8N8Q9-2 341 100% 0 0

Chromosomal Locations for CCDS 73694.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 22851732 22851870 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 22858540 22858630 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 22860629 22860789 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 22866213 22866847 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1026 nt):
ATGAGCCAGGGGCGTGGAAAATATGACTTCTATATTGGTCTGGGATTGGCTATGAGCTCCAGCATTTTCA
TTGGAGGAAGTTTCATTTTGAAAAAAAAGGGCCTCCTTCGACTTGCCAGGAAAGGCTCTATGAGAGCAGT
GGGAGCTGGTGAGGTGGCCAACTTCGCTGCGTATGCGTTTGCACCAGCCACTCTAGTGACTCCACTAGGA
GCTCTCAGCGTGCTAGTAAGTGCCATTCTTTCTTCATACTTTCTCAATGAAAGACTTAATCTTCATGGGA
AAATTGGGTGTTTGCTAAGTATTCTAGGATCTACAGTTATGGTCATTCATGCTCCAAAGGAAGAGGAGAT
TGAGACTTTAAATGAAATGTCTCACAAGCTAGGTGATCCAGGTTTTGTGGTCTTTGCAACCCTTGTGGTC
ATTGTGGCCTTGATATTAATCTTCGTGGTGGGTCCTCGCCATGGACAGACAAACATTCTTGTGTACATAA
CAATCTGCTCTGTAATCGGCGCGTTTTCAGTCTCCTGTGTGAAGGGCCTGGGCATTGCTATCAAGGAGCT
GTTTGCAGGGAAGCCTGTGCTGCGGCATCCCCTGGCTTGGATTCTGCTGCTGAGCCTCATCGTCTGTGTG
AGCACACAGATTAATTACCTAAATAGGGCCCTGGATATATTCAACACTTCCATTGTGACTCCAATATATT
ATGTATTCTTTACAACATCAGTTTTAACTTGTTCAGCTATTCTTTTTAAGGAGTGGCAAGATATGCCTGT
TGACGATGTCATTGGTACTTTGAGTGGCTTCTTTACAATCATTGTGGGGATATTCTTGTTGCATGCCTTT
AAAGACGTCAGCTTTAGTCTAGCAAGTCTGCCTGTGTCTTTTCGAAAAGACGAGAAAGCAATGAATGGCA
ATCTCTCTAATATGTATGAAGTTCTTAATAATAATGAAGAAAGCTTAACCTGTGGAATCGAACAACACAC
TGGTGAAAATGTCTCCCGAAGAAATGGAAATCTGACAGCTTTTTAA

Translation (341 aa):
MSQGRGKYDFYIGLGLAMSSSIFIGGSFILKKKGLLRLARKGSMRAVGAGEVANFAAYAFAPATLVTPLG
ALSVLVSAILSSYFLNERLNLHGKIGCLLSILGSTVMVIHAPKEEEIETLNEMSHKLGDPGFVVFATLVV
IVALILIFVVGPRHGQTNILVYITICSVIGAFSVSCVKGLGIAIKELFAGKPVLRHPLAWILLLSLIVCV
STQINYLNRALDIFNTSIVTPIYYVFFTTSVLTCSAILFKEWQDMPVDDVIGTLSGFFTIIVGIFLLHAF
KDVSFSLASLPVSFRKDEKAMNGNLSNMYEVLNNNEESLTCGIEQHTGENVSRRNGNLTAF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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