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Report for CCDS73170.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
73170.1 Public Homo sapiens 10 ZNF518A 24 110 108 CCDS HistoryNCBI Gene:9849Re-query CCDS DB by CCDS ID:73170.1Re-query CCDS DB by GeneID:9849See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 73170.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000316045.10 ENSP00000479684.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000316045.10Link to Ensembl Protein Viewer:ENSP00000479684.1Re-query CCDS DB by Nucleotide ID:ENST00000316045Re-query CCDS DB by Protein ID:ENSP00000479684
Original member Current member EBI ENST00000614149.2 ENSP00000481657.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000614149.2Link to Ensembl Protein Viewer:ENSP00000481657.1Re-query CCDS DB by Nucleotide ID:ENST00000614149Re-query CCDS DB by Protein ID:ENSP00000481657
Original member Current member EBI ENST00000624776.4 ENSP00000485614.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000624776.4Link to Ensembl Protein Viewer:ENSP00000485614.1Re-query CCDS DB by Nucleotide ID:ENST00000624776Re-query CCDS DB by Protein ID:ENSP00000485614
Original member Current member NCBI NM_001278524.2 NP_001265453.1 Accepted alive Link to Nucleotide Sequence:NM_001278524.2Link to Protein Sequence:NP_001265453.1Re-query CCDS DB by Nucleotide ID:NM_001278524Re-query CCDS DB by Protein ID:NP_001265453Link to BLAST:NP_001265453.1
Original member Current member NCBI NM_001278525.2 NP_001265454.1 Accepted alive Link to Nucleotide Sequence:NM_001278525.2Link to Protein Sequence:NP_001265454.1Re-query CCDS DB by Nucleotide ID:NM_001278525Re-query CCDS DB by Protein ID:NP_001265454Link to BLAST:NP_001265454.1
Original member Current member NCBI NM_001330732.2 NP_001317661.1 Accepted alive Link to Nucleotide Sequence:NM_001330732.2Link to Protein Sequence:NP_001317661.1Re-query CCDS DB by Nucleotide ID:NM_001330732Re-query CCDS DB by Protein ID:NP_001317661Link to BLAST:NP_001317661.1
Original member Current member NCBI NM_001330733.1 NP_001317662.1 Accepted alive Link to Nucleotide Sequence:NM_001330733.1Link to Protein Sequence:NP_001317662.1Re-query CCDS DB by Nucleotide ID:NM_001330733Re-query CCDS DB by Protein ID:NP_001317662Link to BLAST:NP_001317662.1
Original member Current member NCBI NM_001330734.1 NP_001317663.1 Accepted alive Link to Nucleotide Sequence:NM_001330734.1Link to Protein Sequence:NP_001317663.1Re-query CCDS DB by Nucleotide ID:NM_001330734Re-query CCDS DB by Protein ID:NP_001317663Link to BLAST:NP_001317663.1
Original member Current member NCBI NM_001330735.1 NP_001317664.1 Accepted alive Link to Nucleotide Sequence:NM_001330735.1Link to Protein Sequence:NP_001317664.1Re-query CCDS DB by Nucleotide ID:NM_001330735Re-query CCDS DB by Protein ID:NP_001317664Link to BLAST:NP_001317664.1
Original member Current member NCBI NM_001330736.2 NP_001317665.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001330736.2Link to Protein Sequence:NP_001317665.1Re-query CCDS DB by Nucleotide ID:NM_001330736Re-query CCDS DB by Protein ID:NP_001317665Link to BLAST:NP_001317665.1
Original member Current member NCBI NM_001330737.1 NP_001317666.1 Accepted alive Link to Nucleotide Sequence:NM_001330737.1Link to Protein Sequence:NP_001317666.1Re-query CCDS DB by Nucleotide ID:NM_001330737Re-query CCDS DB by Protein ID:NP_001317666Link to BLAST:NP_001317666.1
Original member Current member NCBI NM_001330738.1 NP_001317667.1 Accepted alive Link to Nucleotide Sequence:NM_001330738.1Link to Protein Sequence:NP_001317667.1Re-query CCDS DB by Nucleotide ID:NM_001330738Re-query CCDS DB by Protein ID:NP_001317667Link to BLAST:NP_001317667.1
Original member Current member NCBI NM_014803.4 NP_055618.2 Accepted alive Link to Nucleotide Sequence:NM_014803.4Link to Protein Sequence:NP_055618.2Re-query CCDS DB by Nucleotide ID:NM_014803Re-query CCDS DB by Protein ID:NP_055618Link to BLAST:NP_055618.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001265453.1 1483 Q6AHZ1-1 1483 100% 0 0
NP_001265454.1 1483 Q6AHZ1-1 1483 100% 0 0
NP_001317661.1 1483 Q6AHZ1-1 1483 100% 0 0
NP_001317662.1 1483 Q6AHZ1-1 1483 100% 0 0
NP_001317663.1 1483 Q6AHZ1-1 1483 100% 0 0
NP_001317664.1 1483 Q6AHZ1-1 1483 100% 0 0
NP_001317665.1 1483 Q6AHZ1-1 1483 100% 0 0
NP_001317666.1 1483 Q6AHZ1-1 1483 100% 0 0
NP_001317667.1 1483 Q6AHZ1-1 1483 100% 0 0
NP_055618.2 1483 Q6AHZ1-1 1483 100% 0 0

Chromosomal Locations for CCDS 73170.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 96156323 96160774 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4452 nt):
ATGCCATCTGAACAGAAACAGTTATTTTGTGATGAAAAACAAACTACTTTAAAAAAAGATTATGATGTGA
AAAATGAGATAGTTGATAGGTCGGCACCTAAACCAAAAATTTCAGGAAGTATTCATTATGCACTAAAAAA
TGTGAAAATTGATTTGCCAAAAATAAATATTCCAAATGAAGTCCTATTGAAACATGAAGTTGACAAATAC
AGAAAATTATTTCAGAGTAAACAGCAGACTGCAAGAAAATCTATCAGTATAAAGACTGTAAGCTGTGTAG
AGGAGTGTACATTGCTTCATAAGTCTGAGAGAGCTGAAGAAGAGGGTGTAAAAATGTCTGCAAAAATACT
CAATTTCAGCTGTTTAAAATGCCGAGACAACACTCGATATAGCCCAAATGATTTGCAGAAACACTTTCAA
ATGTGGCACCATGGCGAATTACCTTCATATCCTTGTGAAATGTGCAACTTTTCAGCAAATGACTTTCAGG
TATTTAAACAACACAGACGAACCCATAGAAGCACTTTAGTAAAATGTGACATTTGTAACAATGAGAGTGT
ATATACTTTACTGAACTTGACAAAGCATTTCACATCCACACATTGTGTTAATGGTAATTTTCAATGTGAA
AAGTGTAAGTTCTCCACCCAGGATGTTGGCACATTTGTTCAGCACATTCATAGACATAATGAAATTCATT
ATAAGTGTGGTAAATGTCATCATGTATGTTTTACCAAAGGAGAGCTTCAGAAGCACCTTCATATTCATTC
TGGTACTTTTCCCTTCACTTGTCAATATTGTAGCTATGGTGCCACCAGGAGAGAACACCTTGTAAGACAT
GTTATAACTTTGCACAAAGAACATTTATATGCAAAAGAAAAACTGGAAAAAGACAAATATGAAAAAAGAA
TGGCAAAGACTTCTGCAGGACTTAAGCTAATACTGAAAAGATATAAAATAGGTGCATCAAGGAAGACGTT
CTGGAAACGTAAGAAAATTAACAGTGGAAGTGACAGAAGTATAGAAAAGAACACTCAAGTGCTTAAGAAA
ATGAACAAAACACAGACTAAATCTGAAGACCAGAGCCATGTTGTTCAAGAGCATTTAAGTGAAGAAAAGG
ATGAAAGACTACACTGTGAGAATAATGATAAAGCCCCTGAATCAGAGTCAGAGAAGCCAACTCCTCTGTC
CACTGGGCAAGGTAATAGAGCTGAAGAGGGACCAAACGCTAGTTCAGGTTTCATGAAGACTGCTGTACTA
GGACCTACACTGAAAAATGTAATGATGAAAAATAATAAACTAGCAGTTTCCCCTAACTATAATGCTACGT
TTATGGGCTTCAAGATGATGGATGGAAAACAGCATATTGTATTAAAATTGGTGCCTATCAAACAAAATGT
ATGTTCACCAGGCTCACAGTCAGGTGCTGCAAAGGACGGTACTGCTAATTTGCAGCCCCAGACTTTGGAC
ACTAATGGATTTTTAACAGGAGTAACAACTGAGTTAAATGACACAGTTTATATGAAAGCAGCTACTCCAT
TTTCATGTTCATCTTCTATACTTTCAGGGAAAGCAAGTTCAGAAAAAGAAATGACTTTGATATCTCAAAG
GAATAATATGCTTCAAACAATGGATTATGAGAAAAGTGTATCTTCTTTGTCAGCAACATCAGAATTGGTT
ACAGCATCAGTGAATTTGACCACAAAATTTGAAACAAGAGATAATGTTGACTTCTGGGGAAATCATCTCA
CTCAGAGTCACCCCGAGGTATTAGGTACCACCATTAAAAGTCCAGATAAAGTCAACTGTGTTGCCAAACC
AAATGCATACAACAGTGGAGATATGCATAATTATTGCATTAATTATGGCAACTGTGAGTTACCTGTTGAA
TCCTCCAACCAAGGATCATTACCTTTTCATAATTACTCAAAAGTGAATAATTCTAATAAACGTCGTAGGT
TTTCAGGAACAGCAGTGTATGAAAACCCTCAAAGAGAATCTTCATCCAGCAAAACAGTTGTCCAACAACC
AATTAGTGAATCATTTTTATCACTAGTGAGGCAGGAGAGCTCAAAACCAGATAGCCTATTAGCATCTATT
AGCCTTTTAAATGATAAAGATGGAACTTTAAAAGCAAAATCTGAAATTGAAGAACAGTATGTTTTAGAAA
AAGGACAAAACATTGATGGACAAAACCTGTACAGTAATGAAAATCAAAATTTAGAGTGTGCGACTGAAAA
ATCTAAATGGGAAGACTTTTCTAATGTCGATTCACCTATGATGCCTAGAATCACATCTGTTTTCTCTCTC
CAGAGCCAACAGGCATCAGAATTTCTGCCACCTGAAGTAAACCAATTGCTTCAGGATGTATTGAAAATAA
AACCTGATGTAAAACAAGACTCTAGTAACACTCCAAATAAAGGCTTGCCACTTCATTGTGACCAGTCATT
TCAAAAACACGAGAGAGAAGGCAAAATTGTTGAATCTTCGAAAGATTTCAAAGTGCAAGGCATCTTCCCA
GTTCCACCTGGCAGTGTGGGTATTAATGTGCCTACAAATGATTTGAATTTGAAATTTGGAAAAGAAAAAC
AAGTGTCATCAATACCACAAGATGTGAGAGATTCAGAGAAGATGCCTAGAATTTCAGGTTTTGGCACATT
ACTTAAGACTCAGTCAGATGCGATAATAACACAGCAGCTTGTAAAAGACAAACTACGAGCCACCACACAA
AATTTAGGTTCTTTTTATATGCAGAGTCCACTTTTAAATTCAGAACAAAAAAAAACTATAATTGTTCAGA
CTTCAAAAGGATTCTTAATACCATTGAACATTACTAACAAGCCTGGGCTACCAGTTATTCCTGGAAATGC
ACTTCCATTGGTTAATTCACAAGGTATCCCTGCTTCTCTTTTTGTAAACAAGAAACCTGGGATGGTTTTA
ACACTTAATAATGGGAAACTTGAAGGTGTTTCCGCTGTCAAAACCGAGGGTGCCCCAGCTCGTGGAACTG
TGACTAAGGAGCCTTGCAAAACACCTATTTTGAAGGTAGAACCAAACAATAATTGTCTTACACCTGGACT
TTGTTCCAGCATTGGCAGTTGTTTGAGCATGAAAAGTAGCTCAGAAAATACTTTGCCATTAAAAGGCCCT
TACATTTTGAAACCAACGAGTTCTGTGAAAGCTGTTCTTATTCCTAACATGCTATCTGAGCAACAGAGCA
CTAAGTTGAATATCTCCGATTCAGTAAAACAGCAGAATGAGATTTTTCCAAAACCACCTCTTTATACCTT
CTTGCCTGATGGCAAACAAGCTGTTTTTTTAAAGTGTGTGATGCCAAATAAAACTGAGCTGCTTAAGCCC
AAATTAGTCCAAAATAGTACTTATCAAAATATACAGCCAAAGAAACCTGAAGGAACACCACAAAGAATAT
TGCTGAAAATTTTTAACCCTGTTTTAAATGTGACTGCTGCTAATAATCTGTCAGTAAGCAACTCTGCATC
CTCATTGCAAAAAGACAACGTACCATCTAATCAGATTATAGGAGGAGAGCAGAAAGAGCCAGAATCTAGA
GATGCCTTACCCTTCTTACTAGATGACTTAATGCCAGCAAATGAAATTGTGATAACTTCTACTGCAACAT
GCCCAGAATCTTCTGAGGAACCAATATGTGTCAGTGACTGTTCAGAGTCCAGGGTATTAAGGTGTAAAAC
AAATTGTAGAATTGAGAGGAACTTCAATAGAAAAAAGACTTCCAAAAAAATTTTTTCAAAAACAAAAACT
CATGGAAGTAAAGACTCTGAAACTGCCTTTGTATCTAGAAACAGAAACTGTAAACGAAAGTGTAGGGATA
GTTACCAAGAACCTCCAAGAAGAAAAGCAACATTGCATAGAAAGTGTAAAGAAAAGGCAAAACCTGAAGA
TGTCCGTGAAACATTTGGATTTAGCAGACCTAGGCTTTCAAAAGATTCCATCAGAACTTTGCGGCTTTTC
CCTTTTAGTTCTAAACAGCTTGTGAAATGTCCTAGGAGAAACCAACCAGTTGTAGTTTTGAATCATCCTG
ACGCAGATGCACCAGAAGTAGTAAGTGTAATGAAAACTATTGCTAAATTTAATGGACATGTACTTAAGGT
TTCATTGTCAAAAAGAACTATAAATGCTTTACTGAAACCAGTTTGTTATAACCCTCCTAAAACAACTTAT
GATGATTTTTCCAAGAGGCACAAAACATTTAAACCTGTTAGTTCTGTGAAAGAAAGATTTGTGCTAAAAT
TAACACTCAAAAAGACAAGCAAAAACAATTACCAGATTGTGAAGACTACCTCTGAAAATATTTTGAAGGC
TAAATTTAACTGTTGGTTTTGTGGTAGAGTATTTGACAATCAGGATACTTGGGCTGGTCATGGGCAGAGA
CATTTAATGGAAGCTACTCGGGATTGGAACATGTTAGAATAG

Translation (1483 aa):
MPSEQKQLFCDEKQTTLKKDYDVKNEIVDRSAPKPKISGSIHYALKNVKIDLPKINIPNEVLLKHEVDKY
RKLFQSKQQTARKSISIKTVSCVEECTLLHKSERAEEEGVKMSAKILNFSCLKCRDNTRYSPNDLQKHFQ
MWHHGELPSYPCEMCNFSANDFQVFKQHRRTHRSTLVKCDICNNESVYTLLNLTKHFTSTHCVNGNFQCE
KCKFSTQDVGTFVQHIHRHNEIHYKCGKCHHVCFTKGELQKHLHIHSGTFPFTCQYCSYGATRREHLVRH
VITLHKEHLYAKEKLEKDKYEKRMAKTSAGLKLILKRYKIGASRKTFWKRKKINSGSDRSIEKNTQVLKK
MNKTQTKSEDQSHVVQEHLSEEKDERLHCENNDKAPESESEKPTPLSTGQGNRAEEGPNASSGFMKTAVL
GPTLKNVMMKNNKLAVSPNYNATFMGFKMMDGKQHIVLKLVPIKQNVCSPGSQSGAAKDGTANLQPQTLD
TNGFLTGVTTELNDTVYMKAATPFSCSSSILSGKASSEKEMTLISQRNNMLQTMDYEKSVSSLSATSELV
TASVNLTTKFETRDNVDFWGNHLTQSHPEVLGTTIKSPDKVNCVAKPNAYNSGDMHNYCINYGNCELPVE
SSNQGSLPFHNYSKVNNSNKRRRFSGTAVYENPQRESSSSKTVVQQPISESFLSLVRQESSKPDSLLASI
SLLNDKDGTLKAKSEIEEQYVLEKGQNIDGQNLYSNENQNLECATEKSKWEDFSNVDSPMMPRITSVFSL
QSQQASEFLPPEVNQLLQDVLKIKPDVKQDSSNTPNKGLPLHCDQSFQKHEREGKIVESSKDFKVQGIFP
VPPGSVGINVPTNDLNLKFGKEKQVSSIPQDVRDSEKMPRISGFGTLLKTQSDAIITQQLVKDKLRATTQ
NLGSFYMQSPLLNSEQKKTIIVQTSKGFLIPLNITNKPGLPVIPGNALPLVNSQGIPASLFVNKKPGMVL
TLNNGKLEGVSAVKTEGAPARGTVTKEPCKTPILKVEPNNNCLTPGLCSSIGSCLSMKSSSENTLPLKGP
YILKPTSSVKAVLIPNMLSEQQSTKLNISDSVKQQNEIFPKPPLYTFLPDGKQAVFLKCVMPNKTELLKP
KLVQNSTYQNIQPKKPEGTPQRILLKIFNPVLNVTAANNLSVSNSASSLQKDNVPSNQIIGGEQKEPESR
DALPFLLDDLMPANEIVITSTATCPESSEEPICVSDCSESRVLRCKTNCRIERNFNRKKTSKKIFSKTKT
HGSKDSETAFVSRNRNCKRKCRDSYQEPPRRKATLHRKCKEKAKPEDVRETFGFSRPRLSKDSIRTLRLF
PFSSKQLVKCPRRNQPVVVLNHPDADAPEVVSVMKTIAKFNGHVLKVSLSKRTINALLKPVCYNPPKTTY
DDFSKRHKTFKPVSSVKERFVLKLTLKKTSKNNYQIVKTTSENILKAKFNCWFCGRVFDNQDTWAGHGQR
HLMEATRDWNMLE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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