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Report for CCDS72801.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
72801.1 Public Homo sapiens 1 LEPROT 24 110 108 CCDS HistoryNCBI Gene:54741Re-query CCDS DB by CCDS ID:72801.1Re-query CCDS DB by GeneID:54741See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 72801.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000613538.1 ENSP00000483521.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000613538.1Link to Ensembl Protein Viewer:ENSP00000483521.1Re-query CCDS DB by Nucleotide ID:ENST00000613538Re-query CCDS DB by Protein ID:ENSP00000483521
Original member Current member NCBI NM_001198681.2 NP_001185610.1 Accepted alive Link to Nucleotide Sequence:NM_001198681.2Link to Protein Sequence:NP_001185610.1Re-query CCDS DB by Nucleotide ID:NM_001198681Re-query CCDS DB by Protein ID:NP_001185610Link to BLAST:NP_001185610.1

Chromosomal Locations for CCDS 72801.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 65421417 65421459 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 65425303 65425378 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 65429862 65430048 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 65431803 65431919 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (423 nt):
ATGCGAGACGGAAAAGGTTTTTTGCAAGGCTTCCTGTATTTTGCTCTCGTGGCATTATCCTTCAGTGGGG
CTATTGGACTGACTTTTCTTATGCTGGGATGTGCCTTAGAGGATTATGGCGTTTACTGGCCCTTATTCGT
CCTGATTTTCCACGCCATCTCCCCCATCCCCCATTTCATTGCCAAAAGAGTCACCTATGACTCAGATGCA
ACCAGTAGTGCCTGTCGGGAACTGGCATATTTCTTCACTACTGGAATTGTTGTTTCTGCCTTTGGATTTC
CTGTTATTCTTGCTCGTGTGGCTGTGATCAAATGGGGAGCCTGCGGCCTTGTGTTGGCAGGCAATGCAGT
CATTTTCCTTACAATTCAAGGGTTTTTCCTTATATTTGGAAGAGGAGATGATTTTAGCTGGGAGCAGTGG
TAG

Translation (140 aa):
MRDGKGFLQGFLYFALVALSFSGAIGLTFLMLGCALEDYGVYWPLFVLIFHAISPIPHFIAKRVTYDSDA
TSSACRELAYFFTTGIVVSAFGFPVILARVAVIKWGACGLVLAGNAVIFLTIQGFFLIFGRGDDFSWEQW


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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