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Report for CCDS6911.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
6911.1 Public Homo sapiens 9 TBC1D13 24 110 108 CCDS HistoryNCBI Gene:54662Re-query CCDS DB by CCDS ID:6911.1Re-query CCDS DB by GeneID:54662See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 6911.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000372648.10 ENSP00000361731.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000372648.10Link to Ensembl Protein Viewer:ENSP00000361731.5Re-query CCDS DB by Nucleotide ID:ENST00000372648Re-query CCDS DB by Protein ID:ENSP00000361731
Original member Current member NCBI NM_018201.5 NP_060671.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_018201.5Link to Protein Sequence:NP_060671.3Re-query CCDS DB by Nucleotide ID:NM_018201Re-query CCDS DB by Protein ID:NP_060671Link to BLAST:NP_060671.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_060671.3 400 Q9NVG8-1 400 100% 0 0

Chromosomal Locations for CCDS 6911.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 128787354 128787376 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 128788334 128788407 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 128790735 128790775 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 128791380 128791441 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 128791594 128791693 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 128792492 128792574 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 128797055 128797214 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 128803250 128803460 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 128803956 128804119 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 128805859 128806019 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 128806254 128806311 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 128807814 128807879 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1203 nt):
ATGTCAAGTCTGCACAAGAGCCGAATTGCAGATTTCCAGGATGTCCTGAAGGAGCCCTCAATTGCATTGG
AAAAGCTGCGGGAACTCAGCTTTAGTGGCATCCCCTGTGAGGGCGGACTGCGGTGCCTCTGCTGGAAGAT
TCTCTTGAACTACCTTCCCTTGGAGAGAGCCTCATGGACCTCCATCCTGGCCAAGCAGAGGGAGCTGTAT
GCCCAGTTCCTGAGGGAAATGATCATCCAGCCTGGCATTGCCAAGGCCAACATGGGTGTGTCCAGGGAGG
ATGTGACTTTTGAGGACCATCCACTCAACCCCAACCCTGACAGCCGGTGGAACACGTACTTCAAGGACAA
CGAGGTGCTGCTGCAGATCGACAAAGATGTCCGGAGGTTGTGCCCAGACATTTCCTTCTTCCAGAGGGCC
ACTGACTACCCTTGCCTCCTCATCCTGGACCCCCAGAATGAGTTTGAAACCCTTCGTAAGAGAGTGGAAC
AGACAACACTGAAATCTCAGACGGTGGCCCGGAACCGGAGTGGGGTCACAAATATGAGCTCCCCACACAA
GAACTCTGTGCCATCATCCCTAAATGAGTATGAGGTGCTGCCCAATGGCTGTGAGGCCCACTGGGAGGTG
GTGGAGCGGATCCTGTTCATCTACGCCAAGCTCAACCCTGGCATCGCTTATGTGCAAGGCATGAATGAAA
TCGTGGGGCCCCTCTACTACACCTTTGCCACCGACCCCAATAGTGAGTGGAAAGAGCACGCCGAGGCAGA
CACCTTTTTCTGCTTCACCAACCTCATGGCCGAGATCCGGGACAACTTTATCAAGAGCCTGGATGACTCG
CAGTGTGGCATCACCTACAAGATGGAGAAGGTTTACTCCACCTTGAAAGATAAGGATGTGGAGCTCTACC
TGAAACTGCAAGAGCAGAACATCAAGCCTCAGTTCTTTGCCTTCCGCTGGCTGACACTGCTGCTGTCCCA
GGAGTTCTTGCTGCCTGACGTCATCCGCATCTGGGACTCCCTCTTCGCCGATGACAACCGCTTTGACTTC
CTCCTCCTCGTCTGCTGCGCCATGCTCATGCTGATCCGGGAGCAGTTGCTGGAAGGGGACTTCACTGTGA
ATATGCGGCTGCTGCAGGACTACCCCATCACAGATGTCTGCCAGATCCTGCAGAAAGCCAAGGAGCTCCA
AGACTCAAAGTAG

Translation (400 aa):
MSSLHKSRIADFQDVLKEPSIALEKLRELSFSGIPCEGGLRCLCWKILLNYLPLERASWTSILAKQRELY
AQFLREMIIQPGIAKANMGVSREDVTFEDHPLNPNPDSRWNTYFKDNEVLLQIDKDVRRLCPDISFFQRA
TDYPCLLILDPQNEFETLRKRVEQTTLKSQTVARNRSGVTNMSSPHKNSVPSSLNEYEVLPNGCEAHWEV
VERILFIYAKLNPGIAYVQGMNEIVGPLYYTFATDPNSEWKEHAEADTFFCFTNLMAEIRDNFIKSLDDS
QCGITYKMEKVYSTLKDKDVELYLKLQEQNIKPQFFAFRWLTLLLSQEFLLPDVIRIWDSLFADDNRFDF
LLLVCCAMLMLIREQLLEGDFTVNMRLLQDYPITDVCQILQKAKELQDSK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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