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Report for CCDS6795.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
6795.1 Public Homo sapiens 9 POLE3 24 110 108 CCDS HistoryNCBI Gene:54107Re-query CCDS DB by CCDS ID:6795.1Re-query CCDS DB by GeneID:54107See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 6795.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000374169.7 ENSP00000363284.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000374169.7Link to Ensembl Protein Viewer:ENSP00000363284.3Re-query CCDS DB by Nucleotide ID:ENST00000374169Re-query CCDS DB by Protein ID:ENSP00000363284
Original member Current member EBI ENST00000374171.5 ENSP00000363286.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000374171.5Link to Ensembl Protein Viewer:ENSP00000363286.4Re-query CCDS DB by Nucleotide ID:ENST00000374171Re-query CCDS DB by Protein ID:ENSP00000363286
Original member Current member NCBI NM_001278255.1 NP_001265184.1 Accepted alive Link to Nucleotide Sequence:NM_001278255.1Link to Protein Sequence:NP_001265184.1Re-query CCDS DB by Nucleotide ID:NM_001278255Re-query CCDS DB by Protein ID:NP_001265184Link to BLAST:NP_001265184.1
Original member Current member NCBI NM_017443.5 NP_059139.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_017443.5Link to Protein Sequence:NP_059139.3Re-query CCDS DB by Nucleotide ID:NM_017443Re-query CCDS DB by Protein ID:NP_059139Link to BLAST:NP_059139.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001265184.1 147 Q9NRF9 147 100% 0 0
NP_059139.3 147 Q9NRF9 147 100% 0 0

Chromosomal Locations for CCDS 6795.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 113408811 113408983 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 113409610 113409728 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 113410055 113410140 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 113410228 113410293 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (444 nt):
ATGGCGGAGAGGCCCGAGGACCTAAACCTGCCCAATGCCGTGATCACCAGGATCATCAAGGAGGCGCTCC
CGGACGGTGTCAACATCTCCAAGGAGGCCCGGAGCGCCATCTCCCGCGCCGCCAGCGTCTTCGTGCTGTA
CGCCACATCCTGTGCTAACAACTTTGCAATGAAAGGAAAGCGGAAGACGCTGAATGCCAGTGATGTGCTC
TCAGCCATGGAAGAGATGGAGTTCCAGCGGTTCGTTACCCCATTGAAAGAAGCTCTGGAAGCATATAGGC
GGGAGCAGAAAGGCAAGAAGGAGGCCTCAGAGCAAAAGAAGAAGGACAAAGACAAAAAAACAGACTCGGA
AGAGCAAGACAAGAGCAGGGATGAGGACAATGATGAAGACGAAGAAAGGCTGGAAGAAGAAGAACAGAAT
GAAGAGGAAGAAGTAGACAACTGA

Translation (147 aa):
MAERPEDLNLPNAVITRIIKEALPDGVNISKEARSAISRAASVFVLYATSCANNFAMKGKRKTLNASDVL
SAMEEMEFQRFVTPLKEALEAYRREQKGKKEASEQKKKDKDKKTDSEEQDKSRDEDNDEDEERLEEEEQN
EEEEVDN


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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  VEGA Genome Browser

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