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Report for CCDS63102.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
63102.1 Public Homo sapiens 2 MDH1B 24 110 108 CCDS HistoryNCBI Gene:130752Re-query CCDS DB by CCDS ID:63102.1Re-query CCDS DB by GeneID:130752See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 14, NCBI annotation release 105, Ensembl annotation release 73

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 63102.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000454776.6 ENSP00000389916.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000454776.6Link to Ensembl Protein Viewer:ENSP00000389916.2Re-query CCDS DB by Nucleotide ID:ENST00000454776Re-query CCDS DB by Protein ID:ENSP00000389916
Original member Current member NCBI NM_001282940.2 NP_001269869.1 Accepted alive Link to Nucleotide Sequence:NM_001282940.2Link to Protein Sequence:NP_001269869.1Re-query CCDS DB by Nucleotide ID:NM_001282940Re-query CCDS DB by Protein ID:NP_001269869Link to BLAST:NP_001269869.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001269869.1 517 Q5I0G3-2 517 100% 0 0

Chromosomal Locations for CCDS 63102.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 206738483 206738511 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 206739593 206739658 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 206741054 206741104 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 206745622 206745673 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 206746287 206746426 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 206749020 206749183 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 206750934 206751075 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 206755009 206755505 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 206756898 206757040 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 206757237 206757371 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 206760901 206761013 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 206765250 206765271 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1554 nt):
ATGGCCAAATTCGTCATCGCGGGTAGAGCAGATTGTCCATATTATGCTAAAACAGAACTTGTGGCAGACT
ATTTACAAAAGAATCTTCCTGATTTTCGGATACATAAAATCACACAACGTCCTGAGGTTTGGGAGGATTG
GCTAAAAGATGTGTGTGAAAAGAATAAGTGGAGTCACAAGAATTCCCCTATCATCTGGAGAGAGCTGTTG
GATCGTGGAGGAAAGGGTTTGCTTTTGGGAGGATATAATGAGTTCCTGGAGCATGCTCAGCTTTACTATG
ATGTCACCTCTAGCATGACGACTGAACTGATGATGGTAATTGCTCAAGAGAACCTGGGGGCACATATAGA
AAAAGAGCAGGAGGAAGAAGCCCTGAAAACTTGCATCAACCCCTTGCAGGTCTGGATCACCAGTGCCTCT
GCTCCTGCCTGCTACAACCTAATTCCCATATTGACGAGTGGCGAAGTGTTTGGGATGCATACAGAAATTA
GCATAACTCTATTTGACAACAAGCAGGCGGAAGAACATCTCAAAAGCCTTGTGGTGGAGACCCAAGACCT
GGCATCTCCCGTCCTGCGCAGTGTCTCCATCTGCACGAAGGTGGAGGAGGCCTTCCGCCAGGCCCACGTC
ATTGTGGTGCTGGATGACAGCACCAACAAGGAGGTGTTCACTCTGGAGGACTGCCTCCGAAGCAGGGTGC
CTCTCTGCAGGCTCTATGGGTACCTGATAGAGAAAAATGCTCATGAGTCTGTCAGAGTCATCGTGGGAGG
GAGAACCTTTGTAAACCTGAAGACAGTTTTACTCATGAGATATGCCCCACGCATTGCACACAACATTATT
GCTGTGGCGCTGGGGGTGGAAGGTGAAGCGAAAGCCATACTGGCCAGAAAACTGAAGACAGCTCCTTCAT
ACATTAAAGACGTGATCATTTGGGGTAATATCAGTGGAAATAATTACGTTGATCTGAGAAAAACAAGGGT
GTACAGATATGAGAGTGCCATTTGGGGACCTCTTCATTATTCACGCCCTGTTTTAAACTTGATTTTTGAC
AGTGAGTGGGTAAAAAGAGAATTTGTGGCAATTCTTAAAAACTTGACCACCACAGGAAGACAATTTGGAG
GCATTTTGGCTGCACACAGTATAGCCACTACACTGAAATACTGGTACCATGGCTCACCACCTGGGGAGAT
TGTATCTTTAGGAATATTGAGTGAAGGCCAGTTTGGTATTCCGAAAGGGATCGTCTTTTCTATGCCTGTG
AAATTTGAGAATGGAACTTGGGTGGTTCTTACAGATCTCAAAGATGTTGAAATAAGTGAACAAATAATGA
CCCGAATGACAAGTGATCTAATTCAGGAGAAACTTGTTGCACTTGGAGACAAGATACATTTTCAGCCATA
CCAATCAGGACATAAAGATCTGGTCCCTGATGAAGAAAAAAATCTAGCTATGTCAGATGCAGAGTTTCCA
AATCAGATTCCTCAAACCACCTTTGAAAAGCCACAGAGTCTTGAGTTCCTAAATGAATTTGAAGGCAAAA
CCGTGGAATCCTAA

Translation (517 aa):
MAKFVIAGRADCPYYAKTELVADYLQKNLPDFRIHKITQRPEVWEDWLKDVCEKNKWSHKNSPIIWRELL
DRGGKGLLLGGYNEFLEHAQLYYDVTSSMTTELMMVIAQENLGAHIEKEQEEEALKTCINPLQVWITSAS
APACYNLIPILTSGEVFGMHTEISITLFDNKQAEEHLKSLVVETQDLASPVLRSVSICTKVEEAFRQAHV
IVVLDDSTNKEVFTLEDCLRSRVPLCRLYGYLIEKNAHESVRVIVGGRTFVNLKTVLLMRYAPRIAHNII
AVALGVEGEAKAILARKLKTAPSYIKDVIIWGNISGNNYVDLRKTRVYRYESAIWGPLHYSRPVLNLIFD
SEWVKREFVAILKNLTTTGRQFGGILAAHSIATTLKYWYHGSPPGEIVSLGILSEGQFGIPKGIVFSMPV
KFENGTWVVLTDLKDVEISEQIMTRMTSDLIQEKLVALGDKIHFQPYQSGHKDLVPDEEKNLAMSDAEFP
NQIPQTTFEKPQSLEFLNEFEGKTVES


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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