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Report for CCDS6301.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
6301.1 Public Homo sapiens 8 DCSTAMP 24 110 108 CCDS HistoryNCBI Gene:81501Re-query CCDS DB by CCDS ID:6301.1Re-query CCDS DB by GeneID:81501See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 6301.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000297581.2 ENSP00000297581.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000297581.2Link to Ensembl Protein Viewer:ENSP00000297581.2Re-query CCDS DB by Nucleotide ID:ENST00000297581Re-query CCDS DB by Protein ID:ENSP00000297581
Original member Current member NCBI NM_030788.4 NP_110415.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_030788.4Link to Protein Sequence:NP_110415.1Re-query CCDS DB by Nucleotide ID:NM_030788Re-query CCDS DB by Protein ID:NP_110415Link to BLAST:NP_110415.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_110415.1 470 Q9H295-1 470 100% 0 0

Chromosomal Locations for CCDS 6301.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 104348553 104349581 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 104354877 104355185 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 104356124 104356198 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1413 nt):
ATGGGTATCTGGACCTCAGGCACTGATATCTTCCTAAGTCTTTGGGAGATTTACGTGTCTCCAAGAAGCC
CCGGATGGATGGACTTTATCCAGCATTTGGGAGTTTGCTGTTTGGTTGCTCTTATTTCAGTGGGCCTCCT
GTCTGTGGCCGCCTGCTGGTTTCTGCCATCAATCATAGCGGCCGCTGCCTCCTGGATTATCACGTGTGTT
CTGCTGTGTTGCTCCAAGCATGCACGATGTTTTATTCTTCTTGTCTTTCTCTCTTGTGGCCTGCGTGAAG
GCAGGAATGCTTTGATTGCAGCTGGCACAGGGATCGTCATCTTGGGACACGTAGAAAATATTTTTCACAA
CTTTAAAGGTCTCCTAGATGGTATGACTTGCAACCTAAGGGCAAAGAGCTTTTCCATACATTTTCCACTT
TTGAAAAAATATATTGAGGCAATTCAGTGGATTTATGGCCTTGCCACTCCACTAAGTGTATTTGATGACC
TTGTTTCTTGGAACCAGACCCTGGCAGTCTCTCTTTTCAGTCCCAGCCATGTCCTGGAGGCACAGCTAAA
TGACAGCAAAGGGGAAGTCCTGAGCGTCTTGTACCAGATGGCAACAACCACAGAGGTGTTGTCCTCCCTG
GGTCAGAAGCTACTTGCCTTTGCAGGGCTTTCGCTCGTCCTGCTTGGCACTGGCCTCTTCATGAAGCGAT
TTTTGGGCCCTTGTGGTTGGAAGTATGAAAACATCTACATCACCAGACAATTTGTTCAGTTTGATGAAAG
GGAGAGACATCAACAGAGGCCCTGTGTGCTCCCGCTGAATAAGGAGGAAAGGAGGAAGTATGTCATCATC
CCGACTTTCTGGCCGACTCCTAAAGAAAGGAAAAACCTGGGGCTGTTTTTCCTCCCCATACTTATCCATC
TCTGCATCTGGGTGCTGTTTGCAGCTGTAGATTATCTGCTGTATCGGCTCATTTTCTCAGTGAGCAAGCA
GTTTCAAAGCTTGCCAGGGTTTGAGGTTCACTTGAAACTGCACGGAGAGAAACAAGGAACTCAAGATATT
ATCCATGATTCTTCCTTTAATATATCTGTGTTTGAACCCAACTGTATCCCAAAACCAAAATTCCTTCTAT
CTGAGACCTGGGTTCCTCTCAGTGTTATTCTTTTGATATTAGTGATGCTGGGACTGTTGTCCTCTATCCT
TATGCAACTTAAAATCCTGGTGTCAGCATCTTTCTACCCCAGCGTGGAGAGGAAGCGCATCCAATATCTG
CATGCAAAGCTGCTTAAAAAAAGATCAAAGCAGCCGCTGGGAGAAGTCAAAAGACGGCTGAGTCTCTATC
TTACAAAGATTCATTTCTGGCTTCCAGTCCTGAAAATGATTAGGAAGAAGCAAATGGACATGGCAAGTGC
AGACAAGTCATGA

Translation (470 aa):
MGIWTSGTDIFLSLWEIYVSPRSPGWMDFIQHLGVCCLVALISVGLLSVAACWFLPSIIAAAASWIITCV
LLCCSKHARCFILLVFLSCGLREGRNALIAAGTGIVILGHVENIFHNFKGLLDGMTCNLRAKSFSIHFPL
LKKYIEAIQWIYGLATPLSVFDDLVSWNQTLAVSLFSPSHVLEAQLNDSKGEVLSVLYQMATTTEVLSSL
GQKLLAFAGLSLVLLGTGLFMKRFLGPCGWKYENIYITRQFVQFDERERHQQRPCVLPLNKEERRKYVII
PTFWPTPKERKNLGLFFLPILIHLCIWVLFAAVDYLLYRLIFSVSKQFQSLPGFEVHLKLHGEKQGTQDI
IHDSSFNISVFEPNCIPKPKFLLSETWVPLSVILLILVMLGLLSSILMQLKILVSASFYPSVERKRIQYL
HAKLLKKRSKQPLGEVKRRLSLYLTKIHFWLPVLKMIRKKQMDMASADKS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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