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Report for CCDS62706.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
62706.1 Public Homo sapiens 19 ZNF229 24 110 108 CCDS HistoryNCBI Gene:7772Re-query CCDS DB by CCDS ID:62706.1Re-query CCDS DB by GeneID:7772See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 14, NCBI annotation release 105, Ensembl annotation release 73

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 62706.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000613197.4 ENSP00000479807.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000613197.4Link to Ensembl Protein Viewer:ENSP00000479807.1Re-query CCDS DB by Nucleotide ID:ENST00000613197Re-query CCDS DB by Protein ID:ENSP00000479807
Original member Current member NCBI NM_001278510.3 NP_001265439.2 Accepted alive Link to Nucleotide Sequence:NM_001278510.3Link to Protein Sequence:NP_001265439.2Re-query CCDS DB by Nucleotide ID:NM_001278510Re-query CCDS DB by Protein ID:NP_001265439Link to BLAST:NP_001265439.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001265439.2 819 Q9UJW7-2 819 100% 0 0

Chromosomal Locations for CCDS 62706.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 44428303 44430542 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 44432240 44432366 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 44442563 44442621 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 44442814 44442847 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2460 nt):
ATGGAGACTTTGACCTCAAGGCATGAGAAAAGAGCTCTTCATTCTCAAGCCTCAGCCATTTCCCAAGATA
GGGAGGAGAAGATCATGTCTCAGGAGCCATTGAGCTTCAAGGACGTGGCTGTGGTCTTCACTGAGGAGGA
GCTAGAGCTGCTGGACTCTACCCAGAGGCAGCTGTACCAAGATGTGATGCAGGAGAATTTCAGGAACCTA
CTCTCAGTGGGAGACAAGAATGGAAAGGATACGGAGTATATTCAAGATGAAGAATTAAGGTTCTTTTCAC
ACAAAGAGCTCTCCTCATGCAAAATCTGGGAAGAGGTGGCAGGTGAATTACCTGGGAGCCAAGACTGTAG
AGTAAATCTGCAAGGAAAAGACTTCCAGTTCTCAGAAGATGCTGCTCCCCATCAAGGGTGGGAAGGAGCA
TCTACGCCGTGTTTTCCAATTGAGAATTTCCTGGACAGTCTACAAGGGGATGGGCTTATCGGTCTAGAAA
ATCAACAGTTTCCAGCCTGGAGAGCTATAAGACCAATCCCCATTCAAGGATCTTGGGCAAAAGCGTTTGT
GAACCAGTTAGGGGATGTTCAAGAAAGATGTAAAAATCTCGACACAGAAGACACAGTATATAAATGTAAC
TGGGATGATGACAGCTTTTGCTGGATATCTTGTCATGTTGATCACAGATTCCCTGAAATAGACAAGCCGT
GTGGTTGCAATAAATGCAGAAAAGACTGCATTAAAAACTCTGTACTTCATCGCATTAACCCTGGAGAGAA
TGGCTTGAAAAGTAACGAATACAGAAATGGCTTCAGGGACGATGCAGACCTTCCCCCGCATCCAAGAGTA
CCTTTGAAAGAGAAACTCTGTCAATATGATGAGTTTAGTGAGGGCTTGAGGCACAGTGCCCATCTTAACA
GACATCAAAGAGTTCCCACAGGAGAGAAATCTGTTAAGAGTCTTGAGCGTGGTCGGGGCGTCAGACAGAA
CACGCACATACGTAACCACCCCAGAGCCCCTGTGGGAGACATGCCCTATAGATGTGATGTCTGTGGAAAG
GGGTTCAGGTATAAATCGGTTCTTCTTATTCATCAAGGGGTGCACACAGGAAGGAGACCCTATAAATGTG
AGGAGTGTGGGAAGGCATTTGGTCGAAGTTCAAACCTGCTTGTCCATCAGAGGGTCCACACTGGAGAGAA
ACCATATAAATGCAGCGAGTGTGGGAAGGGCTTCAGTTACAGCTCAGTGCTTCAAGTCCATCAGAGGCTG
CACACAGGGGAGAAGCCCTACACCTGCAGCGAGTGTGGCAAAGGCTTCTGTGCCAAGTCTGCACTGCACA
AACACCAGCACATTCACCCTGGAGAAAAGCCCTACAGCTGTGGCGAGTGTGGAAAGGGATTCAGCTGCAG
CTCCCACCTCAGCAGTCATCAGAAGACACACACCGGCGAGAGGCCCTACCAGTGTGACAAGTGTGGCAAA
GGTTTCAGTCACAACTCGTACCTTCAAGCTCACCAGAGAGTTCACATGGGGCAGCATCTGTACAAATGTA
ACGTGTGTGGTAAGAGTTTCAGTTACAGCTCAGGGCTTCTCATGCATCAGAGACTGCACACAGGAGAGAA
ACCCTACAAATGCGAGTGCGGGAAGAGCTTTGGCCGGAGCTCCGACCTCCACATCCATCAGAGGGTCCAC
ACAGGAGAGAAACCCTATAAATGCAGTGAGTGTGGGAAGGGCTTCCGGCGGAATTCAGACCTTCACAGCC
ACCAGAGGGTCCACACGGGAGAGAGGCCCTACGTGTGTGACGTGTGTGGGAAGGGTTTCATCTACAGCTC
CGACCTCCTTATCCATCAGAGGGTCCACACTGGAGAGAAACCCTATAAATGTGCTGAGTGTGGCAAAGGC
TTCAGTTACAGCTCAGGGCTTCTCATTCACCAGAGAGTCCACACAGGCGAGAAACCTTACAGATGCCAAG
AGTGCGGAAAGGGCTTTAGGTGCACATCAAGCCTTCACAAACATCAGCGAGTCCACACGGGAAAAAAGCC
CTATACGTGTGATCAGTGTGGCAAGGGATTCAGTTATGGCTCTAATCTTCGCACCCACCAGAGGTTGCAC
ACAGGAGAGAAACCCTACACTTGTTGTGAATGTGGGAAGGGTTTCAGATATGGCTCAGGTCTCCTTAGTC
ATAAGAGAGTGCACACTGGCGAGAAGCCATACAGATGCCACGTGTGTGGGAAGGGCTATAGTCAGAGCTC
ACATCTTCAAGGTCATCAGAGGGTCCACACTGGTGAGAAACCCTATAAATGTGAGGAGTGTGGGAAGGGC
TTTGGCCGCAACTCCTGTCTTCATGTTCATCAGAGAGTCCACACTGGAGAGAAGCCCTATACGTGTGGTG
TGTGTGGGAAAGGCTTCAGTTATACCTCAGGTCTGCGGAACCACCAAAGAGTGCATTTAGGCGAGAACCC
TTATAAGTAG

Translation (819 aa):
METLTSRHEKRALHSQASAISQDREEKIMSQEPLSFKDVAVVFTEEELELLDSTQRQLYQDVMQENFRNL
LSVGDKNGKDTEYIQDEELRFFSHKELSSCKIWEEVAGELPGSQDCRVNLQGKDFQFSEDAAPHQGWEGA
STPCFPIENFLDSLQGDGLIGLENQQFPAWRAIRPIPIQGSWAKAFVNQLGDVQERCKNLDTEDTVYKCN
WDDDSFCWISCHVDHRFPEIDKPCGCNKCRKDCIKNSVLHRINPGENGLKSNEYRNGFRDDADLPPHPRV
PLKEKLCQYDEFSEGLRHSAHLNRHQRVPTGEKSVKSLERGRGVRQNTHIRNHPRAPVGDMPYRCDVCGK
GFRYKSVLLIHQGVHTGRRPYKCEECGKAFGRSSNLLVHQRVHTGEKPYKCSECGKGFSYSSVLQVHQRL
HTGEKPYTCSECGKGFCAKSALHKHQHIHPGEKPYSCGECGKGFSCSSHLSSHQKTHTGERPYQCDKCGK
GFSHNSYLQAHQRVHMGQHLYKCNVCGKSFSYSSGLLMHQRLHTGEKPYKCECGKSFGRSSDLHIHQRVH
TGEKPYKCSECGKGFRRNSDLHSHQRVHTGERPYVCDVCGKGFIYSSDLLIHQRVHTGEKPYKCAECGKG
FSYSSGLLIHQRVHTGEKPYRCQECGKGFRCTSSLHKHQRVHTGKKPYTCDQCGKGFSYGSNLRTHQRLH
TGEKPYTCCECGKGFRYGSGLLSHKRVHTGEKPYRCHVCGKGYSQSSHLQGHQRVHTGEKPYKCEECGKG
FGRNSCLHVHQRVHTGEKPYTCGVCGKGFSYTSGLRNHQRVHLGENPYK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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