NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS6190.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
6190.2 Public Homo sapiens 8 ADHFE1 24 110 108 CCDS HistoryNCBI Gene:137872Re-query CCDS DB by CCDS ID:6190.2Re-query CCDS DB by GeneID:137872See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 6190.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000396623.8 ENSP00000379865.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000396623.8Link to Ensembl Protein Viewer:ENSP00000379865.3Re-query CCDS DB by Nucleotide ID:ENST00000396623Re-query CCDS DB by Protein ID:ENSP00000379865
Original member Current member NCBI NM_144650.3 NP_653251.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_144650.3Link to Protein Sequence:NP_653251.2Re-query CCDS DB by Nucleotide ID:NM_144650Re-query CCDS DB by Protein ID:NP_653251Link to BLAST:NP_653251.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_653251.2 467 Q8IWW8-1 467 100% 0 0

Chromosomal Locations for CCDS 6190.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 66432517 66432575 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 66440162 66440199 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 66442798 66442844 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 66444367 66444420 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 66444594 66444748 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 66445218 66445414 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 66447264 66447341 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 66448865 66448970 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 66451953 66452105 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 66454059 66454157 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 66456817 66456895 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 66457070 66457166 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 66460308 66460465 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 66468269 66468352 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1404 nt):
ATGGCCGCTGCCGCCCGAGCCCGGGTCGCGTACTTGCTGAGGCAACTGCAACGCGCAGCGTGCCAGTGCC
CAACTCATTCTCATACTTACTCCCAAGCCCCTGGACTTTCACCTTCTGGGAAAACAACAGATTATGCCTT
TGAGATGGCTGTTTCAAATATTAGATATGGAGCAGCAGTTACAAAGGAAGTAGGAATGGACCTAAAAAAC
ATGGGTGCTAAAAATGTGTGCTTGATGACAGACAAGAACCTCTCCAAGCTCCCTCCTGTGCAAGTAGCTA
TGGATTCCCTAGTGAAGAATGGCATCCCCTTTACGGTTTATGATAATGTGAGAGTGGAACCAACGGATTC
AAGCTTCATGGAAGCTATTGAGTTTGCCCAAAAGGGAGCTTTTGATGCCTATGTTGCTGTCGGTGGTGGC
TCTACCATGGACACCTGTAAGGCTGCTAATCTGTATGCATCCAGCCCTCATTCTGATTTCCTAGATTATG
TCAGTGCCCCCATTGGCAAGGGAAAGCCTGTGTCTGTGCCTCTTAAGCCTCTGATTGCAGTGCCAACTAC
CTCAGGAACCGGGAGTGAAACTACTGGGGTTGCCATTTTTGACTATGAACACTTGAAAGTAAAAATTGGC
ATCACTTCGAGAGCCATCAAACCCACACTGGGACTGATTGATCCTCTGCACACCCTCCACATGCCTGCCC
GAGTGGTCGCCAACAGTGGCTTTGATGTGCTTTGCCATGCCCTGGAGTCATACACCACCCTGCCCTACCA
CCTGCGGAGCCCCTGCCCTTCAAATCCCATCACACGGCCTGCGTACCAGGGCAGCAACCCAATCAGTGAC
ATTTGGGCTATCCACGCGCTGCGGATCGTGGCTAAGTATCTGAAGAGGGCTGTCAGAAATCCCGATGATC
TTGAAGCAAGGTCTCATATGCACTTGGCAAGTGCTTTTGCTGGCATCGGCTTTGGAAATGCTGGTGTTCA
TCTGTGCCATGGAATGTCTTACCCAATTTCAGGTTTAGTGAAGATGTATAAAGCAAAGGATTACAATGTG
GATCACCCACTGGTGCCCCATGGCCTTTCTGTGGTGCTCACGTCCCCAGCGGTGTTCACTTTCACGGCCC
AGATGTTTCCAGAGCGACACCTGGAGATGGCAGAAATACTGGGAGCCGACACCCGCACTGCCAGGATCCA
AGATGCAGGGCTGGTGTTGGCAGACACGCTCCGGAAATTCTTATTCGATCTGGATGTTGATGATGGCCTA
GCAGCTGTTGGTTACTCCAAAGCTGATATCCCCGCACTAGTGAAAGGAACGCTGCCCCAGGAAAGGGTCA
CCAAGCTTGCACCCTGTCCCCAGTCAGAAGAGGATCTGGCTGCTCTGTTTGAAGCTTCAATGAAACTGTA
TTAA

Translation (467 aa):
MAAAARARVAYLLRQLQRAACQCPTHSHTYSQAPGLSPSGKTTDYAFEMAVSNIRYGAAVTKEVGMDLKN
MGAKNVCLMTDKNLSKLPPVQVAMDSLVKNGIPFTVYDNVRVEPTDSSFMEAIEFAQKGAFDAYVAVGGG
STMDTCKAANLYASSPHSDFLDYVSAPIGKGKPVSVPLKPLIAVPTTSGTGSETTGVAIFDYEHLKVKIG
ITSRAIKPTLGLIDPLHTLHMPARVVANSGFDVLCHALESYTTLPYHLRSPCPSNPITRPAYQGSNPISD
IWAIHALRIVAKYLKRAVRNPDDLEARSHMHLASAFAGIGFGNAGVHLCHGMSYPISGLVKMYKAKDYNV
DHPLVPHGLSVVLTSPAVFTFTAQMFPERHLEMAEILGADTRTARIQDAGLVLADTLRKFLFDLDVDDGL
AAVGYSKADIPALVKGTLPQERVTKLAPCPQSEEDLAALFEASMKLY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH