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Report for CCDS59406.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
59406.1 Public Homo sapiens 19 TEAD2 24 110 108 CCDS HistoryNCBI Gene:8463Re-query CCDS DB by CCDS ID:59406.1Re-query CCDS DB by GeneID:8463See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 12, NCBI annotation release 104, Ensembl annotation release 71

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 59406.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000593945.6 ENSP00000469640.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000593945.6Link to Ensembl Protein Viewer:ENSP00000469640.2Re-query CCDS DB by Nucleotide ID:ENST00000593945Re-query CCDS DB by Protein ID:ENSP00000469640
Original member Current member EBI ENST00000598810.5 ENSP00000472109.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000598810.5Link to Ensembl Protein Viewer:ENSP00000472109.1Re-query CCDS DB by Nucleotide ID:ENST00000598810Re-query CCDS DB by Protein ID:ENSP00000472109
Original member Current member NCBI NM_001256660.2 NP_001243589.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001256660.2Link to Protein Sequence:NP_001243589.1Re-query CCDS DB by Nucleotide ID:NM_001256660Re-query CCDS DB by Protein ID:NP_001243589Link to BLAST:NP_001243589.1
Original member Current member NCBI NM_001256661.2 NP_001243590.1 Accepted alive Link to Nucleotide Sequence:NM_001256661.2Link to Protein Sequence:NP_001243590.1Re-query CCDS DB by Nucleotide ID:NM_001256661Re-query CCDS DB by Protein ID:NP_001243590Link to BLAST:NP_001243590.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001243589.1 451 Q15562-4 451 100% 0 0
NP_001243590.1 451 Q15562-4 451 100% 0 0

Chromosomal Locations for CCDS 59406.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 49341324 49341437 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 49342438 49342590 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 49343231 49343398 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 49347190 49347363 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 49348703 49348845 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 49351301 49351365 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 49355148 49355206 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 49355312 49355419 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 49355959 49355970 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 49357252 49357314 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 49359435 49359499 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 49359844 49360075 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1356 nt):
ATGGGGGAACCCCGGGCTGGGGCCGCCCTGGACGATGGCAGCGGCTGGACGGGCAGTGAGGAAGGCAGTG
AGGAGGGTACCGGCGGCAGTGAGGGGGCTGGGGGTGACGGGGGCCCGGATGCAGAGGGGGTGTGGAGCCC
AGACATTGAGCAGAGCTTCCAGGAGGCCCTGGCCATCTATCCACCCTGCGGCCGCCGGAAAATAATTTTG
TCTGATGAAGGCAAGATGTATGGTCGGAATGAACTGATCGCCCGCTACATCAAGCTGAGAACGGGGAAGA
CCCGAACTCGAAAACAGGTTTCTAGTCACATCCAGGTTTTGGCCCGAAGGAAATCAAGGGAAATCCAGTC
CAAGTTGAAGGCTCTGAACGTGGACCAGGTTTCCAAGGACAAGGCTTTCCAGACAATGGCAACCATGTCC
TCTGCCCAGCTCATCTCCGCGCCTTCTCTGCAGGCCAAACTGGGTCCCACTGGTCCTCAGGCCTCTGAGC
TTTTCCAGTTTTGGTCTGGAGGATCTGGGCCCCCCTGGAATGTTCCAGATGTGAAGCCATTCTCACAGAC
ACCGTTCACCTTGTCACTGACTCCCCCATCTACTGACCTCCCAGGGTACGAGCCCCCCCAAGCCCTCTCA
CCCCTGCCCCCACCTACCCCATCGCCCCCAGCCTGGCAGGCTCGGGGCCTGGGCACCGCCCGGTTGCAGC
TGGTAGAGTTCTCAGCCTTCGTGGAACCGCCAGATGCAGTTGATTCTTACCAGAGGCACCTGTTCGTGCA
CATCAGCCAGCACTGCCCCAGCCCCGGAGCGCCGCCGCTCGAGAGTGTGGACGTCCGGCAGATCTACGAC
AAATTCCCTGAGAAAAAGGGTGGCCTCCGAGAGCTATATGATCGTGGCCCCCCCCATGCCTTCTTCCTGG
TCAAGTTCTGGGCGGACCTGAACTGGGGCCCAAGTGGTGAGGAGGCAGGGGCCGGTGGCAGCATCAGCAG
TGGTGGCTTCTACGGAGTGAGCAGCCAGTATGAGAGCCTGGAACACATGACCCTCACCTGTTCCTCCAAG
GTCTGCTCTTTTGGCAAGCAGGTGGTGGAGAAGGTGGAGACGGAACGGGCCCAGCTGGAGGACGGCAGAT
TTGTGTACCGCCTGCTGCGCTCGCCCATGTGCGAGTACCTGGTGAATTTCTTGCACAAGTTGCGGCAGCT
GCCTGAGCGATACATGATGAACAGCGTCCTGGAAAACTTCACCATCCTCCAGGTGGTGACAAACAGAGAC
ACCCAGGAACTGCTGCTCTGCACCGCCTATGTCTTCGAGGTCTCCACCAGCGAGCGTGGGGCCCAGCATC
ACATTTACCGCCTGGTCAGGGACTGA

Translation (451 aa):
MGEPRAGAALDDGSGWTGSEEGSEEGTGGSEGAGGDGGPDAEGVWSPDIEQSFQEALAIYPPCGRRKIIL
SDEGKMYGRNELIARYIKLRTGKTRTRKQVSSHIQVLARRKSREIQSKLKALNVDQVSKDKAFQTMATMS
SAQLISAPSLQAKLGPTGPQASELFQFWSGGSGPPWNVPDVKPFSQTPFTLSLTPPSTDLPGYEPPQALS
PLPPPTPSPPAWQARGLGTARLQLVEFSAFVEPPDAVDSYQRHLFVHISQHCPSPGAPPLESVDVRQIYD
KFPEKKGGLRELYDRGPPHAFFLVKFWADLNWGPSGEEAGAGGSISSGGFYGVSSQYESLEHMTLTCSSK
VCSFGKQVVEKVETERAQLEDGRFVYRLLRSPMCEYLVNFLHKLRQLPERYMMNSVLENFTILQVVTNRD
TQELLLCTAYVFEVSTSERGAQHHIYRLVRD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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