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Report for CCDS59393.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
59393.1 Public Homo sapiens 19 TEX101 24 110 108 CCDS HistoryNCBI Gene:83639Re-query CCDS DB by CCDS ID:59393.1Re-query CCDS DB by GeneID:83639See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 12, NCBI annotation release 104, Ensembl annotation release 71

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 59393.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000598265.2 ENSP00000472769.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000598265.2Link to Ensembl Protein Viewer:ENSP00000472769.1Re-query CCDS DB by Nucleotide ID:ENST00000598265Re-query CCDS DB by Protein ID:ENSP00000472769
Original member Current member NCBI NM_001130011.3 NP_001123483.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001130011.3Link to Protein Sequence:NP_001123483.1Re-query CCDS DB by Nucleotide ID:NM_001130011Re-query CCDS DB by Protein ID:NP_001123483Link to BLAST:NP_001123483.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001123483.1 249 Q9BY14-1 249 100% 0 0

Chromosomal Locations for CCDS 59393.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 43415920 43415983 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 43416099 43416242 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 43416373 43416555 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 43417878 43418006 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 43418168 43418397 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (750 nt):
ATGGGAACCCCTCGTATCCAGCATTTGCTGATCCTCCTGGTCCTAGGAGCCTCCCTCCTGACCTCGGGCC
TAGAGCTGTATTGTCAAAAGGGTCTGTCCATGACTGTGGAAGCAGATCCAGCCAATATGTTTAACTGGAC
CACAGAGGAAGTGGAGACTTGTGACAAAGGGGCACTTTGCCAGGAAACCATACTAATAATTAAAGCAGGG
ACTGAGACAGCCATTTTGGCCACGAAGGGCTGCATCCCGGAAGGGGAGGAGGCCATAACAATTGTCCAGC
ACTCTTCACCTCCCGGCCTGATCGTGACCTCCTACAGTAACTACTGTGAGGATTCCTTCTGTAATGACAA
AGACAGCCTGTCTCAGTTTTGGGAGTTCAGTGAGACCACAGCTTCCACTGTGTCAACAACCCTCCATTGT
CCAACCTGTGTGGCTTTGGGGACCTGTTTCAGTGCTCCTTCTCTTCCCTGTCCCAATGGTACAACTCGAT
GCTATCAAGGAAAACTTGAGATCACTGGAGGTGGCATTGAGTCGTCTGTGGAGGTCAAAGGCTGTACAGC
CATGATTGGCTGCAGGCTGATGTCTGGAATCTTAGCAGTAGGACCCATGTTTGTGAGGGAAGCGTGCCCA
CATCAGCTGCTCACTCAACCTCGAAAGACTGAAAATGGGGCCACCTGTCTTCCCATTCCTGTTTGGGGGT
TACAGCTACTGCTGCCATTGCTGCTGCCATCATTTATTCACTTTTCCTAA

Translation (249 aa):
MGTPRIQHLLILLVLGASLLTSGLELYCQKGLSMTVEADPANMFNWTTEEVETCDKGALCQETILIIKAG
TETAILATKGCIPEGEEAITIVQHSSPPGLIVTSYSNYCEDSFCNDKDSLSQFWEFSETTASTVSTTLHC
PTCVALGTCFSAPSLPCPNGTTRCYQGKLEITGGGIESSVEVKGCTAMIGCRLMSGILAVGPMFVREACP
HQLLTQPRKTENGATCLPIPVWGLQLLLPLLLPSFIHFS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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