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Report for CCDS59329.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
59329.1 Public Homo sapiens 19 ZNF555 24 110 108 CCDS HistoryNCBI Gene:148254Re-query CCDS DB by CCDS ID:59329.1Re-query CCDS DB by GeneID:148254See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 12, NCBI annotation release 104, Ensembl annotation release 71

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 59329.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000591539.1 ENSP00000467893.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000591539.1Link to Ensembl Protein Viewer:ENSP00000467893.1Re-query CCDS DB by Nucleotide ID:ENST00000591539Re-query CCDS DB by Protein ID:ENSP00000467893
Original member Current member NCBI NM_001172775.2 NP_001166246.1 Accepted alive Link to Nucleotide Sequence:NM_001172775.2Link to Protein Sequence:NP_001166246.1Re-query CCDS DB by Nucleotide ID:NM_001172775Re-query CCDS DB by Protein ID:NP_001166246Link to BLAST:NP_001166246.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001166246.1 627 Q8NEP9-4 627 100% 0 0

Chromosomal Locations for CCDS 59329.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 2841573 2841575 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 2850587 2850713 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 2851468 2851651 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 2852383 2853952 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1884 nt):
ATGGACTCAGTGGTCTTTGAGGATGTGGCTGTGGACTTCACCCTGGAGGAGTGGGCTTTGCTGGATTCTG
CTCAGAGGGACCTCTACAGAGATGTGATGCTGGAGACCTTTCAGAACCTGGCCTCAGTAGATGATGAAAC
TCAATTTAAGGCCAGTGGGTCAGTTTCTCAGCAGGATATTTATGGAGAGAAAATACCCAAGGAATCTAAA
ATAGCCACGTTCACCAGAAATGTTTCCTGGGCCTCTGTTTTAGGAAAAATTTGGGACAGTCTTAGCATCG
AAGATCAAACCACAAACCAGGGGAGAAATCTCAGAAATCATGGGTTGGAGAGACTCTGTGAAAGTAATGA
TCAATGTGGAGAAGCCCTCAGCCAGATTCCACATCTTAATCTGTACAAGAAAATTCCACCTGGAGTAAAA
CAGTATGAATACAACACGTACGGAAAAGTCTTCATGCATCGCCGCACATCCCTCAAGAGTCCCATCACAG
TTCACACTGGACACAAACCATATCAGTGCCAGGAATGTGGGCAGGCCTACAGTTGTCGTTCACACCTAAG
AATGCATGTGAGAACCCACAATGGAGAGAGACCCTATGTGTGTAAATTATGTGGGAAAACCTTTCCTCGT
ACTTCCTCCCTCAATCGGCATGTAAGGATTCACACTGCTGAGAAAACCTACGAATGTAAGCAATGTGGGA
AAGCCTTTATTGACTTCTCAAGTCTTACTAGTCATCTCAGAAGTCACACCGGAGAGAAGCCATATAAGTG
TAAGGAATGTGGGAAAGCTTTCAGTTATTCCTCAACGTTTCGAAGACACACAATAACACACACTGGCGAG
AAGCCATATAAATGTAAGGAATGTGCGGAAGCCTTTAGTTATTCCTCAACTTTTCGAAGACATATGATTT
CACACACTGGAGAGAAGCCACATAAATGTAAAGAATGTGGGGAGGCCTTCAGTTATTCTTCGGCTTTTCG
AAGACACATGATAACACACACTGGAGAGAAACCCTACGAATGCAAACAATGTGGGAAAACCTTCATTTAT
CTCCAGTCCTTTCGAAGACATGAAAGGATTCACACTGGAGAGAAACCCTACGAATGCAAACAGTGTGGGA
AGACCTTCATTTATCCCCAGTCCTTTCGAAGACATGAAAGGACTCATGGTGGAGAGAAACCCTATGAATG
CAACCAGTGCGGGAAAGCATTCAGTCACCCCTCCTCCTTTCGAGGACACATGAGGGTGCACACTGGAGAG
AAACCCTATGAGTGCAAGCAATGTGGGAAAACTTTCAATTGGCCCATATCTTTACGAAAACATATGAGAA
CACATACTAGAGAGAAACCCTATGAATGTAAGCAGTGTGGGAAAGCCTTCAGCTTGTCTGCTTGCTTTCG
AGAACATGTGAGAATGCACCCTGAAGACAAATCCTATGAATGCAAGCTATGTGGGAAAGCTTTCTATTGC
CACATATCCTTACAAAAACATATGAGAAGACATACCGCAGAGAAACTCTATAAATGCAAGCAGTGTGGGA
AAGCTTTCAGTTGGCCTGAACTTTTGCAACAACATGTGAGAACGCACACTGTAGAGAAGCCCTATGAATG
TAAGGAATGTGGGAAGGTCTTCAAATGGCCATCATCTTTACCAATACATATGAGACTGCACACTGGAGAG
AAACCTTATCAATGTAAGCATTGTGGGAAAGCATTCAATTGTTCCTCATCCTTAAGGCGACATGTGAGAA
TACACACTACAGAAAAACAGTATAAGTGTAATGTAGGACATCCTCCTGCAAATGAATTCATGTGCAGTGC
TTCAGAAAAGTCACACCAGGAGAGAGATCTGATCAAAGTTGTAAATATGGTGTTGCCTTTATGA

Translation (627 aa):
MDSVVFEDVAVDFTLEEWALLDSAQRDLYRDVMLETFQNLASVDDETQFKASGSVSQQDIYGEKIPKESK
IATFTRNVSWASVLGKIWDSLSIEDQTTNQGRNLRNHGLERLCESNDQCGEALSQIPHLNLYKKIPPGVK
QYEYNTYGKVFMHRRTSLKSPITVHTGHKPYQCQECGQAYSCRSHLRMHVRTHNGERPYVCKLCGKTFPR
TSSLNRHVRIHTAEKTYECKQCGKAFIDFSSLTSHLRSHTGEKPYKCKECGKAFSYSSTFRRHTITHTGE
KPYKCKECAEAFSYSSTFRRHMISHTGEKPHKCKECGEAFSYSSAFRRHMITHTGEKPYECKQCGKTFIY
LQSFRRHERIHTGEKPYECKQCGKTFIYPQSFRRHERTHGGEKPYECNQCGKAFSHPSSFRGHMRVHTGE
KPYECKQCGKTFNWPISLRKHMRTHTREKPYECKQCGKAFSLSACFREHVRMHPEDKSYECKLCGKAFYC
HISLQKHMRRHTAEKLYKCKQCGKAFSWPELLQQHVRTHTVEKPYECKECGKVFKWPSSLPIHMRLHTGE
KPYQCKHCGKAFNCSSSLRRHVRIHTTEKQYKCNVGHPPANEFMCSASEKSHQERDLIKVVNMVLPL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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