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Report for CCDS58633.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
58633.1 Public Homo sapiens 18 SERPINB7 24 110 108 CCDS HistoryNCBI Gene:8710Re-query CCDS DB by CCDS ID:58633.1Re-query CCDS DB by GeneID:8710See the combined annotation on chromosome 18 in Sequence Viewer

Public since: CCDS release 11, NCBI annotation release 103, Ensembl annotation release 68

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 58633.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000540675.5 ENSP00000444572.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000540675.5Link to Ensembl Protein Viewer:ENSP00000444572.1Re-query CCDS DB by Nucleotide ID:ENST00000540675Re-query CCDS DB by Protein ID:ENSP00000444572
Original member Current member NCBI NM_001261831.2 NP_001248760.1 Accepted alive Link to Nucleotide Sequence:NM_001261831.2Link to Protein Sequence:NP_001248760.1Re-query CCDS DB by Nucleotide ID:NM_001261831Re-query CCDS DB by Protein ID:NP_001248760Link to BLAST:NP_001248760.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001248760.1 363 O75635-2 363 100% 0 0

Chromosomal Locations for CCDS 58633.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 18 (NC_000018.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18See the combined annotation on chromosome 18 in Sequence Viewer

Chromosome Start Stop Links
18 63782373 63782540 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 63793161 63793277 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 63796266 63796383 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 63798604 63798746 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 63800866 63801012 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 63804237 63804635 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1092 nt):
ATGGCCTCCCTTGCTGCAGCAAATGCAGAGTTTTGCTTCAACCTGTTCAGAGAGATGGATGACAATCAAG
GAAATGGAAATGTGTTCTTTTCCTCTCTGAGCCTCTTCGCTGCCCTGGCCCTGGTCCGCTTGGGCGCTCA
AGATGACTCCCTCTCTCAGATTGATAAGTCAGGGCTCCAGTCTCAACTGAAAAGAGTTTTTTCTGATATA
AATGCATCCCACAAGGATTATGATCTCAGCATTGTGAATGGGCTTTTTGCTGAAAAAGTGTATGGCTTTC
ATAAGGACTACATTGAGTGTGCCGAAAAATTATACGATGCCAAAGTGGAGCGAGTTGACTTTACGAATCA
TTTAGAAGACACTAGACGTAATATTAATAAGTGGGTTGAAAATGAAACACATGGCAAAATCAAGAACGTG
ATTGGTGAAGGTGGCATAAGCTCATCTGCTGTAATGGTGCTGGTGAATGCTGTGTACTTCAAAGGCAAGT
GGCAATCAGCCTTCACCAAGAGCGAAACCATAAATTGCCATTTCAAATCTCCCAAGTGCTCTGGGAAGGC
AGTCGCCATGATGCATCAGGAACGGAAGTTCAATTTGTCTGTTATTGAGGACCCATCAATGAAGATTCTT
GAGCTCAGATACAATGGTGGCATAAACATGTACGTTCTGCTGCCTGAGAATGACCTCTCTGAAATTGAAA
ACAAACTGACCTTTCAGAATCTAATGGAATGGACCAATCCAAGGCGAATGACCTCTAAGTATGTTGAGGT
ATTTTTTCCTCAGTTCAAGATAGAGAAGAATTATGAAATGAAACAATATTTGAGAGCCCTAGGGCTGAAA
GATATCTTTGATGAATCCAAAGCAGATCTCTCTGGGATTGCTTCGGGGGGTCGTCTGTATATATCAAGGA
TGATGCACAAATCTTACATAGAGGTCACTGAGGAGGGCACCGAGGCTACTGCTGCCACAGGAAGTAATAT
TGTAGAAAAGCAACTCCCTCAGTCCACGCTGTTTAGAGCTGACCACCCATTCCTATTTGTTATCAGGAAG
GATGACATCATCTTATTCAGTGGCAAAGTTTCTTGCCCTTGA

Translation (363 aa):
MASLAAANAEFCFNLFREMDDNQGNGNVFFSSLSLFAALALVRLGAQDDSLSQIDKSGLQSQLKRVFSDI
NASHKDYDLSIVNGLFAEKVYGFHKDYIECAEKLYDAKVERVDFTNHLEDTRRNINKWVENETHGKIKNV
IGEGGISSSAVMVLVNAVYFKGKWQSAFTKSETINCHFKSPKCSGKAVAMMHQERKFNLSVIEDPSMKIL
ELRYNGGINMYVLLPENDLSEIENKLTFQNLMEWTNPRRMTSKYVEVFFPQFKIEKNYEMKQYLRALGLK
DIFDESKADLSGIASGGRLYISRMMHKSYIEVTEEGTEATAATGSNIVEKQLPQSTLFRADHPFLFVIRK
DDIILFSGKVSCP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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