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Report for CCDS5755.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
5755.2 Public Homo sapiens 7 ZNF277 24 110 108 CCDS HistoryNCBI Gene:11179Re-query CCDS DB by CCDS ID:5755.2Re-query CCDS DB by GeneID:11179See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 5755.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000361822.8 ENSP00000354501.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000361822.8Link to Ensembl Protein Viewer:ENSP00000354501.3Re-query CCDS DB by Nucleotide ID:ENST00000361822Re-query CCDS DB by Protein ID:ENSP00000354501
Original member Current member NCBI NM_021994.3 NP_068834.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_021994.3Link to Protein Sequence:NP_068834.2Re-query CCDS DB by Nucleotide ID:NM_021994Re-query CCDS DB by Protein ID:NP_068834Link to BLAST:NP_068834.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_068834.2 450 Q9NRM2 450 100% 0 0

Chromosomal Locations for CCDS 5755.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 112206717 112206807 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 112286873 112287074 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 112295869 112295957 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 112296229 112296311 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 112318182 112318273 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 112327717 112327827 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 112330084 112330216 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 112336104 112336171 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 112337730 112337826 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 112339843 112339885 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 112340872 112341046 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 112342561 112342729 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1353 nt):
ATGGCTGCTTCCAAGACCCAGGGGGCTGTCGCCCGAATGCAGGAAGACCGTGATGGGAGCTGCAGCACAG
TCGGGGGTGTAGGTTATGGGGACAGTAAGGATTGTATCCTGGAGCCGCTTTCCCTGCCAGAAAGTCCAGG
TGGCACCACCACTTTAGAAGGTTCTCCATCTGTGCCTTGTATTTTCTGTGAAGAACATTTTCCTGTGGCT
GAACAAGACAAACTTCTGAAGCACATGATTATTGAGCATAAGATTGTCATAGCTGATGTCAAGTTGGTTG
CTGATTTCCAAAGGTACATTTTATATTGGAGGAAAAGGTTCACTGAACAGCCCATCACAGATTTTTGTAG
TGTAATAAGAATTAATTCCACTGCTCCATTTGAAGAACAAGAGAATTATTTTTTGTTATGTGACGTTTTA
CCAGAAGATAGAATTCTTAGAGAAGAGCTTCAGAAACAGAGACTGAGAGAAATTCTGGAACAACAGCAGC
AAGAACGAAATGATACCAATTTTCATGGCGTTTGTATGTTTTGCAATGAAGAATTCCTTGGAAACAGATC
TGTTATTTTGAACCACATGGCCAGAGAACATGCTTTCAACATTGGATTGCCAGACAACATTGTAAACTGC
AATGAATTTTTGTGTACATTACAGAAAAAGCTTGACAATTTGCAGTGCTTGTACTGTGAGAAGACCTTCA
GGGACAAAAATACACTTAAAGATCACATGAGGAAAAAACAGCATCGTAAGATTAATCCTAAGAACAGAGA
ATATGACAGATTTTATGTCATCAATTATTTGGAACTTGGAAAATCGTGGGAAGAAGTTCAGTTGGAAGAT
GATCGGGAGTTGCTGGACCATCAGGAAGATGACTGGTCTGATTGGGAAGAACACCCTGCCTCTGCAGTCT
GCTTATTTTGTGAAAAGCAAGCAGAAACAATTGAGAAGTTGTATGTCCACATGGAGGATGCACACGAATT
TGATCTTCTCAAAATAAAGTCAGAACTTGGATTAAATTTCTATCAGCAAGTGAAACTGGTCAATTTTATT
CGGAGGCAAGTTCACCAATGCAGATGTTATGGCTGCCATGTGAAGTTCAAATCCAAAGCAGACTTAAGAA
CTCACATGGAAGAAACTAAACACACTTCGCTGCTCCCCGATAGAAAGACGTGGGATCAACTGGAGTATTA
TTTTCCAACCTATGAAAATGACACTCTCCTGTGTACACTATCTGACAGTGAAAGTGACCTGACAGCTCAG
GAACAAAATGAAAATGTTCCCATCATCAGTGAAGATACATCTAAACTGTATGCTTTGAAACAAAGCAGTA
TTTTGAACCAGTTGCTACTATAA

Translation (450 aa):
MAASKTQGAVARMQEDRDGSCSTVGGVGYGDSKDCILEPLSLPESPGGTTTLEGSPSVPCIFCEEHFPVA
EQDKLLKHMIIEHKIVIADVKLVADFQRYILYWRKRFTEQPITDFCSVIRINSTAPFEEQENYFLLCDVL
PEDRILREELQKQRLREILEQQQQERNDTNFHGVCMFCNEEFLGNRSVILNHMAREHAFNIGLPDNIVNC
NEFLCTLQKKLDNLQCLYCEKTFRDKNTLKDHMRKKQHRKINPKNREYDRFYVINYLELGKSWEEVQLED
DRELLDHQEDDWSDWEEHPASAVCLFCEKQAETIEKLYVHMEDAHEFDLLKIKSELGLNFYQQVKLVNFI
RRQVHQCRCYGCHVKFKSKADLRTHMEETKHTSLLPDRKTWDQLEYYFPTYENDTLLCTLSDSESDLTAQ
EQNENVPIISEDTSKLYALKQSSILNQLLL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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