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Report for CCDS5714.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
5714.1 Public Homo sapiens 7 MOGAT3 24 110 108 CCDS HistoryNCBI Gene:346606Re-query CCDS DB by CCDS ID:5714.1Re-query CCDS DB by GeneID:346606See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 5714.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000223114.9 ENSP00000223114.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000223114.9Link to Ensembl Protein Viewer:ENSP00000223114.4Re-query CCDS DB by Nucleotide ID:ENST00000223114Re-query CCDS DB by Protein ID:ENSP00000223114
Original member Current member NCBI NM_178176.4 NP_835470.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_178176.4Link to Protein Sequence:NP_835470.1Re-query CCDS DB by Nucleotide ID:NM_178176Re-query CCDS DB by Protein ID:NP_835470Link to BLAST:NP_835470.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_835470.1 341 Q86VF5-1 341 100% 0 0

Chromosomal Locations for CCDS 5714.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 101195946 101196100 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 101196187 101196389 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 101198191 101198365 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 101198626 101198830 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 101200234 101200304 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 101200408 101200515 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 101200746 101200854 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1026 nt):
ATGGGAGTTGCCACAACCCTGCAGCCCCCAACCACTTCCAAAACCTTGCAGAAGCAGCATCTAGAAGCAG
TGGGCGCCTACCAATATGTGCTCACTTTCCTCTTCATGGGCCCTTTCTTCTCCCTTCTTGTCTTTGTCCT
CCTCTTCACGTCACTCTGGCCCTTCTCTGTTTTTTACTTGGTGTGGCTCTATGTGGACTGGGACACACCC
AACCAAGGTGGAAGGCGTTCGGAGTGGATAAGGAACCGGGCAATTTGGAGACAACTAAGGGATTATTATC
CTGTCAAGCTGGTGAAAACAGCAGAGCTGCCCCCGGATCGGAACTACGTGCTGGGCGCCCACCCTCATGG
GATCATGTGTACAGGCTTCCTCTGTAATTTCTCCACCGAGAGCAATGGCTTCTCCCAGCTCTTCCCGGGG
CTCCGGCCCTGGTTAGCCGTGCTGGCTGGCCTCTTCTACCTCCCGGTCTATCGCGACTACATCATGTCCT
TTGGACTCTGTCCGGTGAGCCGCCAGAGCCTGGACTTCATCCTGTCCCAGCCCCAGCTCGGGCAGGCCGT
GGTCATCATGGTGGGGGGTGCGCACGAGGCCCTGTATTCAGTCCCCGGGGAGCACTGCCTTACGCTCCAG
AAGCGCAAAGGCTTCGTGCGCCTGGCGCTGAGGCACGGGGCGTCCCTGGTGCCCGTGTACTCCTTTGGGG
AGAATGACATCTTTAGACTTAAGGCTTTTGCCACAGGCTCCTGGCAGCATTGGTGCCAGCTCACCTTCAA
GAAGCTCATGGGCTTCTCTCCTTGCATCTTCTGGGGTCGCGGTCTCTTCTCAGCCACCTCCTGGGGCCTG
CTGCCCTTTGCTGTGCCCATCACCACTGTGGTGGGCCGCCCCATCCCCGTCCCCCAGCGCCTCCACCCCA
CCGAGGAGGAAGTCAATCACTATCACGCCCTCTACATGACGGCCCTGGAGCAGCTCTTCGAGGAGCACAA
GGAAAGCTGTGGGGTCCCCGCTTCCACCTGCCTCACCTTCATCTAG

Translation (341 aa):
MGVATTLQPPTTSKTLQKQHLEAVGAYQYVLTFLFMGPFFSLLVFVLLFTSLWPFSVFYLVWLYVDWDTP
NQGGRRSEWIRNRAIWRQLRDYYPVKLVKTAELPPDRNYVLGAHPHGIMCTGFLCNFSTESNGFSQLFPG
LRPWLAVLAGLFYLPVYRDYIMSFGLCPVSRQSLDFILSQPQLGQAVVIMVGGAHEALYSVPGEHCLTLQ
KRKGFVRLALRHGASLVPVYSFGENDIFRLKAFATGSWQHWCQLTFKKLMGFSPCIFWGRGLFSATSWGL
LPFAVPITTVVGRPIPVPQRLHPTEEEVNHYHALYMTALEQLFEEHKESCGVPASTCLTFI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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