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Report for CCDS55526.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
55526.1 Public Homo sapiens X MAMLD1 24 110 108 CCDS HistoryNCBI Gene:10046Re-query CCDS DB by CCDS ID:55526.1Re-query CCDS DB by GeneID:10046See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 55526.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000432680.7 ENSP00000414517.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000432680.7Link to Ensembl Protein Viewer:ENSP00000414517.2Re-query CCDS DB by Nucleotide ID:ENST00000432680Re-query CCDS DB by Protein ID:ENSP00000414517
Original member Current member NCBI NM_001177465.3 NP_001170936.1 Accepted alive Link to Nucleotide Sequence:NM_001177465.3Link to Protein Sequence:NP_001170936.1Re-query CCDS DB by Nucleotide ID:NM_001177465Re-query CCDS DB by Protein ID:NP_001170936Link to BLAST:NP_001170936.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001170936.1 998 Q13495-3 998 100% 0 0

Chromosomal Locations for CCDS 55526.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 150445517 150445612 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 150469745 150471490 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 150509962 150510046 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 150512004 150513073 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2997 nt):
ATGGATGACTGGAAAAGTCGGCTTGTAATCAAGAGCATGCTTCCCCATTTCGCCATGGTGGGAAATCGTC
AGGAGCCCAGAAAGCTCCAGGAATCGGGAACTGTTAAGAGGAGACAAGAAGAAGACCACTTCCAGTTTCC
AGACATGGCTGATGGGGGCTACCCTAATAAAATTAAGAGGCCTTGCCTTGAAGATGTCACCCTTGCAATG
GGCCCAGGTGCTCATCCTAGTACTGCTTGTGCAGAACTGCAGGTCCCTCCATTGACAATAAATCCTAGCC
CTGCGGCTATGGGAGTGGCTGGCCAGTCATTACTGCTGGAGAATAACCCTATGAATGGCAACATCATGGG
CTCACCATTTGTAGTACCACAGACTACAGAAGTGGGACTGAAAGGGCCCACTGTTCCTTACTATGAGAAA
ATCAACAGCGTGCCGGCTGTAGACCAGGAGCTTCAAGAGCTGCTAGAGGAGCTCACCAAAATTCAAGACC
CTTCTCCAAATGAGCTAGATCTTGAGAAGATACTGGGGACGAAGCCAGAAGAGCCACTGGTTTTAGATCA
TCCCCAGGCAACCCTAAGCACAACTCCCAAGCCTTCGGTTCAGATGTCACACTTGGAGAGCCTGGCTTCC
AGCAAGGAGTTTGCTTCTAGTTGCAGCCAAGTTACTGGCATGTCACTTCAGATCCCATCCTCCTCCACAG
GGATCAGCTATTCGATTCCTTCCACCAGTAAGCAGATAGTGTCACCGAGTTCTTCAATGGCACAGTCCAA
GAGCCAGGTCCAGGCCATGCTCCCTGTCGCTCTGCCCCCCTTACCAGTGCCTCAGTGGCATCACGCCCAC
CAGCTGAAGGCGTTGGCAGCCAGCAAGCAGGGGTCTGCTACAAAGCAGCAAGGGCCCACCCCCAGTTGGT
CTGGTCTGCCTCCTCCAGGACTCTCTCCACCTTACCGCCCAGTGCCATCACCACACCCACCACCGCTGCC
ACTGCCACCACCACCACCCCCATTCAGCCCCCAGAGCCTCATGGTGTCCTGCATGTCGTCCAATACCTTG
TCGGGTAGCACTCTCCGAGGCTCTCCCAATGCCTTACTGTCAAGCATGACGTCCAGCAGCAATGCTGCCC
TGGGGCCCGCCATGCCCTATGCTCCTGAGAAGCTCCCCAGCCCTGCTCTCACTCAACAGCCGCAGTTCGG
CCCTCAGAGCTCCATTCTTGCCAACCTCATGTCCTCTACCATCAAAACCCCTCAAGGACACCTGATGTCT
GCTCTGCCTGCCAGCAACCCTGGGCCGTCCCCACCCTATCGCCCAGAGAAGCTCTCTAGCCCAGGCTTGC
CACAGCAGTCCTTCACCCCACAGTGTTCCCTGATCCGAAGCCTCACTCCCACCAGTAATCTTCTAAGCCA
GCAACAGCAGCAGCAGCAGCAGCAGCAGCAAGCAAATGTGATCTTTAAGCCCATAAGCAGCAACTCATCC
AAAACCCTGAGCATGATCATGCAGCAGGGGATGGCAAGCTCCAGCCCAGGAGCCACGGAGCCATTTACTT
TTGGCAACACCAAGCCCTTGTCCCATTTTGTTTCTGAGCCGGGTCCCCAGAAGATGCCCTCCATGCCTAC
CACCTCTAGGCAGCCTTCCCTGCTCCACTACCTGCAGCAGCCGACACCAACGCAGGCCTCCTCAGCCACT
GCCTCCTCCACGGCCACTGCCACCTTGCAGCTGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCCTGACC
ATTCTTCATTCCTTCTGCAGCAGATGATGCAGCAACCCCAGCGTTTTCAGCGATCAGTGGCCTCAGATTC
CATGCCTGCTCTGCCCAGACAGCAAGAGGAACAGAGATCAGGTCTTATGGCAATGACCCCTGAACGGCAG
AATGCATATATCTCCCAACAGATGAGTCCATTTGAAGCCGTCCAAGAACAAGTCACCTCCAAGTGTAGCC
GGATCAAGGCAAGCCCCCCATCTAGCAAGCACTTGATGCCACCCAGAACTGGGCTTCTTCAGAACAATCT
GAGTCCAGGAATGATCCCACTCACCAGGCACCAGAGCTGCGAGGGCATGGGAGTGATCTCACCAACTCTG
GGGAAGCGGCAAGGAATTTTCACCTCCAGCCCCCAGTGTCCCATCCTCTCACACTCAGGCCAGACTCCCC
TGGGCAGACTTGACTCTGTCTGCCAGCATATGCAGAGTCCCAAGGCCACCCCACCAGAAGTGCCCCTGCC
TGGGTTCTGTCCCAGCTCCCTGGGCACCCAGTCCTTGAGTCCCCACCAGCTCAGACGGCCTAGTGTGCCA
AGAATGCCCACTGCGTTCAACAATGCTGCATGGGTCACAGCGGCAGCAGCTGTGACCACAGCAGTTTCGG
GGAAAACACCCCTCAGCCAAGTGGATAATAGCGTTCAGCAGCACTCACCTTCTGGCCAGGCCTGCCTTCA
GAGGCCATCTGATTGGGAGGCACAAGTGCCCGCTGCGATGGGAACACAAGTGCCCCTGGCCAACAACCCC
AGCTTCAGCCTGCTGGGCAGCCAGAGCCTCAGGCAGAGCCCGGTACAGGGCCCGGTGCCTGTAGCAAACA
CCACCAAGTTCCTCCAGCAGGGTATGGCCAGCTTTAGTCCCCTGAGCCCCATACAGGGCATCGAGCCACC
AAGCTATGTGGCTGCTGCTGCCACCGCTGCTGCTGCTTCTGCCGTTGCTGCCAGCCAGTTCCCAGGTCCG
TTCGACAGAACGGATATTCCCCCTGAGCTGCCACCTGCCGACTTTTTGCGCCAGCCCCAACCCCCACTAA
ATGATCTGATTTCGTCACCTGACTGCAATGAGGTAGATTTCATTGAAGCTCTCTTGAAAGGCTCCTGTGT
GAGCCCAGATGAAGACTGGGTGTGCAACTTGAGGCTGATCGACGACATTTTGGAACAGCATGCTGCTGCT
CAAAATGCCACAGCCCAGAATTCTGGGCAAGTCACCCAGGATGCTGGGGCACTTTAA

Translation (998 aa):
MDDWKSRLVIKSMLPHFAMVGNRQEPRKLQESGTVKRRQEEDHFQFPDMADGGYPNKIKRPCLEDVTLAM
GPGAHPSTACAELQVPPLTINPSPAAMGVAGQSLLLENNPMNGNIMGSPFVVPQTTEVGLKGPTVPYYEK
INSVPAVDQELQELLEELTKIQDPSPNELDLEKILGTKPEEPLVLDHPQATLSTTPKPSVQMSHLESLAS
SKEFASSCSQVTGMSLQIPSSSTGISYSIPSTSKQIVSPSSSMAQSKSQVQAMLPVALPPLPVPQWHHAH
QLKALAASKQGSATKQQGPTPSWSGLPPPGLSPPYRPVPSPHPPPLPLPPPPPPFSPQSLMVSCMSSNTL
SGSTLRGSPNALLSSMTSSSNAALGPAMPYAPEKLPSPALTQQPQFGPQSSILANLMSSTIKTPQGHLMS
ALPASNPGPSPPYRPEKLSSPGLPQQSFTPQCSLIRSLTPTSNLLSQQQQQQQQQQQANVIFKPISSNSS
KTLSMIMQQGMASSSPGATEPFTFGNTKPLSHFVSEPGPQKMPSMPTTSRQPSLLHYLQQPTPTQASSAT
ASSTATATLQLQQQQQQQQQQPDHSSFLLQQMMQQPQRFQRSVASDSMPALPRQQEEQRSGLMAMTPERQ
NAYISQQMSPFEAVQEQVTSKCSRIKASPPSSKHLMPPRTGLLQNNLSPGMIPLTRHQSCEGMGVISPTL
GKRQGIFTSSPQCPILSHSGQTPLGRLDSVCQHMQSPKATPPEVPLPGFCPSSLGTQSLSPHQLRRPSVP
RMPTAFNNAAWVTAAAAVTTAVSGKTPLSQVDNSVQQHSPSGQACLQRPSDWEAQVPAAMGTQVPLANNP
SFSLLGSQSLRQSPVQGPVPVANTTKFLQQGMASFSPLSPIQGIEPPSYVAAAATAAAASAVAASQFPGP
FDRTDIPPELPPADFLRQPQPPLNDLISSPDCNEVDFIEALLKGSCVSPDEDWVCNLRLIDDILEQHAAA
QNATAQNSGQVTQDAGAL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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