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Report for CCDS55525.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
55525.1 Public Homo sapiens X MAMLD1 24 110 108 CCDS HistoryNCBI Gene:10046Re-query CCDS DB by CCDS ID:55525.1Re-query CCDS DB by GeneID:10046See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 55525.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000426613.5 ENSP00000397438.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000426613.5Link to Ensembl Protein Viewer:ENSP00000397438.2Re-query CCDS DB by Nucleotide ID:ENST00000426613Re-query CCDS DB by Protein ID:ENSP00000397438
Original member Current member NCBI NM_001177466.3 NP_001170937.1 Accepted alive Link to Nucleotide Sequence:NM_001177466.3Link to Protein Sequence:NP_001170937.1Re-query CCDS DB by Nucleotide ID:NM_001177466Re-query CCDS DB by Protein ID:NP_001170937Link to BLAST:NP_001170937.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001170937.1 749 Q13495-4 749 100% 0 0

Chromosomal Locations for CCDS 55525.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 150445517 150445612 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 150469745 150471490 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 150473680 150473802 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 150503274 150503517 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 150509962 150510002 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2250 nt):
ATGGATGACTGGAAAAGTCGGCTTGTAATCAAGAGCATGCTTCCCCATTTCGCCATGGTGGGAAATCGTC
AGGAGCCCAGAAAGCTCCAGGAATCGGGAACTGTTAAGAGGAGACAAGAAGAAGACCACTTCCAGTTTCC
AGACATGGCTGATGGGGGCTACCCTAATAAAATTAAGAGGCCTTGCCTTGAAGATGTCACCCTTGCAATG
GGCCCAGGTGCTCATCCTAGTACTGCTTGTGCAGAACTGCAGGTCCCTCCATTGACAATAAATCCTAGCC
CTGCGGCTATGGGAGTGGCTGGCCAGTCATTACTGCTGGAGAATAACCCTATGAATGGCAACATCATGGG
CTCACCATTTGTAGTACCACAGACTACAGAAGTGGGACTGAAAGGGCCCACTGTTCCTTACTATGAGAAA
ATCAACAGCGTGCCGGCTGTAGACCAGGAGCTTCAAGAGCTGCTAGAGGAGCTCACCAAAATTCAAGACC
CTTCTCCAAATGAGCTAGATCTTGAGAAGATACTGGGGACGAAGCCAGAAGAGCCACTGGTTTTAGATCA
TCCCCAGGCAACCCTAAGCACAACTCCCAAGCCTTCGGTTCAGATGTCACACTTGGAGAGCCTGGCTTCC
AGCAAGGAGTTTGCTTCTAGTTGCAGCCAAGTTACTGGCATGTCACTTCAGATCCCATCCTCCTCCACAG
GGATCAGCTATTCGATTCCTTCCACCAGTAAGCAGATAGTGTCACCGAGTTCTTCAATGGCACAGTCCAA
GAGCCAGGTCCAGGCCATGCTCCCTGTCGCTCTGCCCCCCTTACCAGTGCCTCAGTGGCATCACGCCCAC
CAGCTGAAGGCGTTGGCAGCCAGCAAGCAGGGGTCTGCTACAAAGCAGCAAGGGCCCACCCCCAGTTGGT
CTGGTCTGCCTCCTCCAGGACTCTCTCCACCTTACCGCCCAGTGCCATCACCACACCCACCACCGCTGCC
ACTGCCACCACCACCACCCCCATTCAGCCCCCAGAGCCTCATGGTGTCCTGCATGTCGTCCAATACCTTG
TCGGGTAGCACTCTCCGAGGCTCTCCCAATGCCTTACTGTCAAGCATGACGTCCAGCAGCAATGCTGCCC
TGGGGCCCGCCATGCCCTATGCTCCTGAGAAGCTCCCCAGCCCTGCTCTCACTCAACAGCCGCAGTTCGG
CCCTCAGAGCTCCATTCTTGCCAACCTCATGTCCTCTACCATCAAAACCCCTCAAGGACACCTGATGTCT
GCTCTGCCTGCCAGCAACCCTGGGCCGTCCCCACCCTATCGCCCAGAGAAGCTCTCTAGCCCAGGCTTGC
CACAGCAGTCCTTCACCCCACAGTGTTCCCTGATCCGAAGCCTCACTCCCACCAGTAATCTTCTAAGCCA
GCAACAGCAGCAGCAGCAGCAGCAGCAGCAAGCAAATGTGATCTTTAAGCCCATAAGCAGCAACTCATCC
AAAACCCTGAGCATGATCATGCAGCAGGGGATGGCAAGCTCCAGCCCAGGAGCCACGGAGCCATTTACTT
TTGGCAACACCAAGCCCTTGTCCCATTTTGTTTCTGAGCCGGGTCCCCAGAAGATGCCCTCCATGCCTAC
CACCTCTAGGCAGCCTTCCCTGCTCCACTACCTGCAGCAGCCGACACCAACGCAGGCCTCCTCAGCCACT
GCCTCCTCCACGGCCACTGCCACCTTGCAGCTGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCCTGACC
ATTCTTCATTCCTTCTGCAGCAGATGATGCAGCAACCCCAGCGTTTTCAGCGATCAGTGGCCTCAGATTC
CATGCCTGCTCTGCCCAGACAGGGCTGTTGCCATCTGTTTGCATGGACTTCTGCAGCTAGCTCGGTGAAG
CCCCAGCATCAACACGGGAACTCTTTCACTAGCAGGCAAGATCCTCAGCCTGGAGACGTGTCACCGTCTA
ACATTACTCATGTAGACAAAGCCTGCAAGCTTGGGGAAGCCAGGCACCCCCAGGTCAGCCTCGGGCGACA
GCCCCCGTCCTGCCAGGCCCTGGGGAGTGAGTCCTTCCTGCCCGGCAGCTCCTTTGCTCATGAGCTGGCC
CGAGTCACCTCCTCGTACAGCACCTCAGAGGCAGCGCCCTGGGGCAGCTGGGATCCGAAGGCCTGGAGGC
AGGTGCCCGCTCCACTACTGCCTAGCTGCGACGCCACAGCAAGAGGAACAGAGATCAGGTCTTATGGCAA
TGACCCCTGA

Translation (749 aa):
MDDWKSRLVIKSMLPHFAMVGNRQEPRKLQESGTVKRRQEEDHFQFPDMADGGYPNKIKRPCLEDVTLAM
GPGAHPSTACAELQVPPLTINPSPAAMGVAGQSLLLENNPMNGNIMGSPFVVPQTTEVGLKGPTVPYYEK
INSVPAVDQELQELLEELTKIQDPSPNELDLEKILGTKPEEPLVLDHPQATLSTTPKPSVQMSHLESLAS
SKEFASSCSQVTGMSLQIPSSSTGISYSIPSTSKQIVSPSSSMAQSKSQVQAMLPVALPPLPVPQWHHAH
QLKALAASKQGSATKQQGPTPSWSGLPPPGLSPPYRPVPSPHPPPLPLPPPPPPFSPQSLMVSCMSSNTL
SGSTLRGSPNALLSSMTSSSNAALGPAMPYAPEKLPSPALTQQPQFGPQSSILANLMSSTIKTPQGHLMS
ALPASNPGPSPPYRPEKLSSPGLPQQSFTPQCSLIRSLTPTSNLLSQQQQQQQQQQQANVIFKPISSNSS
KTLSMIMQQGMASSSPGATEPFTFGNTKPLSHFVSEPGPQKMPSMPTTSRQPSLLHYLQQPTPTQASSAT
ASSTATATLQLQQQQQQQQQQPDHSSFLLQQMMQQPQRFQRSVASDSMPALPRQGCCHLFAWTSAASSVK
PQHQHGNSFTSRQDPQPGDVSPSNITHVDKACKLGEARHPQVSLGRQPPSCQALGSESFLPGSSFAHELA
RVTSSYSTSEAAPWGSWDPKAWRQVPAPLLPSCDATARGTEIRSYGNDP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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