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Report for CCDS55443.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
55443.1 Public Homo sapiens X ZMYM3 24 110 108 CCDS HistoryNCBI Gene:9203Re-query CCDS DB by CCDS ID:55443.1Re-query CCDS DB by GeneID:9203See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 55443.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000373981.5 ENSP00000363093.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000373981.5Link to Ensembl Protein Viewer:ENSP00000363093.1Re-query CCDS DB by Nucleotide ID:ENST00000373981Re-query CCDS DB by Protein ID:ENSP00000363093
Original member Current member NCBI NM_001171163.1 NP_001164634.1 Accepted alive Link to Nucleotide Sequence:NM_001171163.1Link to Protein Sequence:NP_001164634.1Re-query CCDS DB by Nucleotide ID:NM_001171163Re-query CCDS DB by Protein ID:NP_001164634Link to BLAST:NP_001164634.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001164634.1 495 Q14202-3 495 100% 0 0

Chromosomal Locations for CCDS 55443.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 71249443 71249679 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 71250026 71250203 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 71250432 71250726 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 71251178 71251244 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 71251558 71251601 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 71252589 71253255 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1488 nt):
ATGGACCCCAGTGATTTCCCCAGTCCATTTGACCCATTGACCCTGCCAGAGAAGCCCCTGGCTGGAGACC
TACCAGTAGACATGGAATTTGGAGAGGATCTACTGGAATCCCAGACTGCCCCAACTCGAGGATGGGCCCC
CCCTGGCCCTTCTCCATCCTCGGGAGCCCTGGACCTGCTTGATACCCCTGCTGGCCTGGAAAAAGACCCT
GGAGTCCTGGATGGAGCCACTGAGTTGCTGGGGCTGGGGGGGCTGCTCTATAAAGCCCCCTCTCCCCCGG
AGGTGGACCACGGTCCTGAGGGAACCCTGGCATGGGATGCAGGAGATCAGACCCTAGAGCCTGGACCAGG
GGGCCAGACCCCTGAGGTGGTACCACCTGATCCAGGGGCTGGGGCAAATTCCTGTTCACCTGAGGGGCTA
CTAGAGCCTTTGGCTCCAGATTCTCCAATAACACTGCAGTCCCCACATATTGAAGAGGAGGAGACCACCT
CCATAGCTACTGCAAGAAGGGGCTCCCCTGGGCAGGAGGAGGAGCTTCCCCAAGGGCAGCCACAGAGCCC
AAATGCCCCGCCTAGCCCTTCAGTGGGAGAGACTCTGGGGGATGGAATCAACAGTTCTCAGACCAAACCT
GGGGGCTCTAGCCCCCCTGCACATCCTTCCTTGCCAGGAGATGGCCTGACTGCGAAGGCGAGTGAGAAGC
CGCCTGAACGGAAGAGAAGCGAGCGCGTTAGGAGAGCAGAACCTCCAAAACCTGAGGTTGTAGATTCCAC
TGAGAGCATTCCAGTGTCAGATGAGGATTCTGATGCCATGGTAGATGACCCCAATGATGAGGACTTTGTG
CCATTCCGGCCCCGGCGCTCTCCTCGCATGTCCCTACGCTCAAGTGTGTCACAAAGGGCCGGGCGCTCTG
CAGTGGGCACCAAGATGACTTGTGCACATTGCCGGACACCACTGCAGAAGGGGCAGACTGCCTATCAGCG
CAAGGGGCTGCCTCAGCTCTTCTGCTCGTCATCCTGCCTCACCACTTTCTCCAAGAAGCCCTCGGGCAAA
AAGACCTGTACCTTCTGCAAGAAGGAGATCTGGAACACCAAGGACTCGGTTGTGGCGCAGACTGGTTCTG
GAGGCTCCTTCCATGAGTTCTGCACATCCGTCTGTCTCTCCCTGTATGAGGCCCAGCAGCAGCGCCCGAT
CCCCCAGTCTGGGGATCCCGCCGACGCTACTCGCTGCAGCATATGCCAGAAGACTGGAGAGGTCCTGCAC
GAGGTCAGCAATGGCAGCGTGGTACACCGGCTCTGCAGCGATTCTTGCTTCTCCAAATTCCGGGCCAACA
AGGGACTGAAAACCAACTGTTGTGACCAGTGTGGGGCTTACATCTACACCAAGACCGGGAGTCCTGGCCC
TGAGCTCCTCTTCCACGAGGGCCAACAAAAGCGGTTCTGCAACACAACCTGCTTGGGGGCGTACAAGAAG
GTGGGGCCGAGGGAGTAG

Translation (495 aa):
MDPSDFPSPFDPLTLPEKPLAGDLPVDMEFGEDLLESQTAPTRGWAPPGPSPSSGALDLLDTPAGLEKDP
GVLDGATELLGLGGLLYKAPSPPEVDHGPEGTLAWDAGDQTLEPGPGGQTPEVVPPDPGAGANSCSPEGL
LEPLAPDSPITLQSPHIEEEETTSIATARRGSPGQEEELPQGQPQSPNAPPSPSVGETLGDGINSSQTKP
GGSSPPAHPSLPGDGLTAKASEKPPERKRSERVRRAEPPKPEVVDSTESIPVSDEDSDAMVDDPNDEDFV
PFRPRRSPRMSLRSSVSQRAGRSAVGTKMTCAHCRTPLQKGQTAYQRKGLPQLFCSSSCLTTFSKKPSGK
KTCTFCKKEIWNTKDSVVAQTGSGGSFHEFCTSVCLSLYEAQQQRPIPQSGDPADATRCSICQKTGEVLH
EVSNGSVVHRLCSDSCFSKFRANKGLKTNCCDQCGAYIYTKTGSPGPELLFHEGQQKRFCNTTCLGAYKK
VGPRE


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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