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Report for CCDS54801.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
54801.1 Public Homo sapiens 4 ADAD1 24 110 108 CCDS HistoryNCBI Gene:132612Re-query CCDS DB by CCDS ID:54801.1Re-query CCDS DB by GeneID:132612See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 54801.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000388725.2 ENSP00000373377.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000388725.2Link to Ensembl Protein Viewer:ENSP00000373377.2Re-query CCDS DB by Nucleotide ID:ENST00000388725Re-query CCDS DB by Protein ID:ENSP00000373377
Original member Current member NCBI NM_001159295.2 NP_001152767.1 Accepted alive Link to Nucleotide Sequence:NM_001159295.2Link to Protein Sequence:NP_001152767.1Re-query CCDS DB by Nucleotide ID:NM_001159295Re-query CCDS DB by Protein ID:NP_001152767Link to BLAST:NP_001152767.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001152767.1 558 Q96M93-3 558 100% 0 0

Chromosomal Locations for CCDS 54801.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 4 (NC_000004.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 122380124 122380241 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 122380992 122381180 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 122383799 122383966 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 122393589 122393657 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 122396252 122396377 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 122407908 122408031 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 122411222 122411392 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 122412580 122412809 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 122415379 122415616 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 122421261 122421390 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 122429626 122429739 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1677 nt):
ATGCTGAAAAAGAACCTGCCAGTTCAACCAGCGACAAAGACGATAACTACACCCACAGGATGGTCCTCAG
AAAGTTACGGCCTGTCCAAGATGGCATCCAAGGTTACGCAAGTAACGGGTAATTTTCCAGAGCCGTTGCT
TTCCAAGAATCTTTCATCTATTTCAAATCCTGTCCTTCCTCCAAAAAAAATACCTAAGGAATTTATAATG
AAATACAAACGTGGAGAGATAAATCCTGTGTCAGCCTTGCACCAGTTTGCACAAATGCAGCGAGTTCAGC
TTGACCTTAAGGAAACTGTGACAACAGGTAATGTTATGGGACCATATTTTGCCTTTTGTGCTGTGGTGGA
TGGTATTCAGTACAAGACTGGACTGGGACAAAATAAAAAGGAGTCTAGATCCAATGCAGCAAAATTAGCT
CTTGATGAGCTTCTACAACTGGATGAACCTGAACCACGAATTTTAGAAACATCAGGTCCTCCTCCTTTCC
CTGCAGAACCTGTTGTTTTATCTGAACTAGCATATGTTTCAAAAGTACATTATGAAGGGAGACATATTCA
ATATGCAAAGATTTCACAGATCGTTAAAGAAAGATTTAATCAACTAATTTCTAATCGTTCAGAATACCTG
AAATATAGCAGTTCATTGGCTGCTTTTATAATTGAAAGAGCTGGACAACATGAGGTTGTAGCTATAGGCA
CAGGTGAATACAATTACAGCCAGGACATTAAGCCAGATGGAAGAGTATTGCATGACACTCATGCTGTTGT
TACAGCAAGAAGGTCTCTTCTTAGGTACTTTTATAGACAACTTCTGCTCTTCTACAGCAAAAATCCTGCT
ATGATGGAAAAATCAATATTTTGTACAGAACCAACTTCTAATCTACTCACTCTTAAACAGAATATCAACA
TTTGCCTTTACATGAACCAGTTGCCTAAAGGATCAGCCCAGATTAAGTCACAGTTACGTCTTAATCCACA
TTCTATATCTGCATTTGAAGCCAATGAAGAACTCTGTCTCCACGTGGCTGTTGAAGGCAAAATTTATCTG
ACTGTTTACTGTCCTAAAGATGGTGTTAATAGAATAAGCAGTATGTCCTCAAGTGACAAATTGACCAGAT
GGGAAGTGCTTGGTGTACAGGGAGCATTGCTGAGTCATTTTATACAGCCAGTTTACATCAGCAGTATACT
TATTGGTGATGGGAATTGCAGTGATACCAGAGGCTTAGAAATCGCTATAAAGCAACGTGTTGATGATGCA
CTCACTTCAAAACTTCCAATGTTTTACTTAGTCAACAGACCTCATATTAGTTTAGTACCCTCTGCATATC
CCCTTCAAATGAACTTGGAATATAAATTTCTGAGTCTGAATTGGGCACAAGGAGATGTTTCTTTGGAGAT
TGTGGATGGCCTGAGTGGGAAGATCACTGAAAGTTCCCCATTTAAAAGTGGTATGTCAATGGCAAGTCGG
CTTTGTAAGGCTGCAATGTTAAGTCGGTTTAACCTGCTTGCCAAAGAAGCTAAAAAAGAATTACTTGAAG
CTGGTACATATCATGCAGCTAAGTGTATGTCTGCCTCCTATCAAGAAGCTAAATGTAAGTTGAAATCCTA
CTTACAACAACATGGCTATGGATCCTGGATTGTGAAATCTCCCTGCATAGAGCAATTTAACATGTGA

Translation (558 aa):
MLKKNLPVQPATKTITTPTGWSSESYGLSKMASKVTQVTGNFPEPLLSKNLSSISNPVLPPKKIPKEFIM
KYKRGEINPVSALHQFAQMQRVQLDLKETVTTGNVMGPYFAFCAVVDGIQYKTGLGQNKKESRSNAAKLA
LDELLQLDEPEPRILETSGPPPFPAEPVVLSELAYVSKVHYEGRHIQYAKISQIVKERFNQLISNRSEYL
KYSSSLAAFIIERAGQHEVVAIGTGEYNYSQDIKPDGRVLHDTHAVVTARRSLLRYFYRQLLLFYSKNPA
MMEKSIFCTEPTSNLLTLKQNINICLYMNQLPKGSAQIKSQLRLNPHSISAFEANEELCLHVAVEGKIYL
TVYCPKDGVNRISSMSSSDKLTRWEVLGVQGALLSHFIQPVYISSILIGDGNCSDTRGLEIAIKQRVDDA
LTSKLPMFYLVNRPHISLVPSAYPLQMNLEYKFLSLNWAQGDVSLEIVDGLSGKITESSPFKSGMSMASR
LCKAAMLSRFNLLAKEAKKELLEAGTYHAAKCMSASYQEAKCKLKSYLQQHGYGSWIVKSPCIEQFNM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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