NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS5085.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
5085.1 Public Homo sapiens 6 CDK19 24 110 108 CCDS HistoryNCBI Gene:23097Re-query CCDS DB by CCDS ID:5085.1Re-query CCDS DB by GeneID:23097See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 5085.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000368911.8 ENSP00000357907.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000368911.8Link to Ensembl Protein Viewer:ENSP00000357907.3Re-query CCDS DB by Nucleotide ID:ENST00000368911Re-query CCDS DB by Protein ID:ENSP00000357907
Original member Current member NCBI NM_015076.5 NP_055891.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_015076.5Link to Protein Sequence:NP_055891.1Re-query CCDS DB by Nucleotide ID:NM_015076Re-query CCDS DB by Protein ID:NP_055891Link to BLAST:NP_055891.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_055891.1 502 Q9BWU1-1 502 100% 0 0

Chromosomal Locations for CCDS 5085.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 110614535 110614666 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 110621104 110621370 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 110622088 110622166 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 110622815 110622912 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 110623290 110623362 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 110626776 110626845 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 110627002 110627145 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 110632030 110632161 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 110638649 110638706 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 110667434 110667574 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 110670431 110670541 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 110746126 110746201 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 110815009 110815136 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1509 nt):
ATGGATTATGATTTCAAGGCGAAGCTGGCGGCGGAGCGGGAGCGGGTGGAGGATTTGTTTGAGTACGAAG
GGTGCAAAGTGGGACGCGGCACCTACGGTCACGTCTACAAGGCGAGGCGGAAAGATGGAAAAGATGAAAA
GGAATATGCATTGAAGCAAATTGAAGGCACAGGAATATCCATGTCGGCTTGTAGAGAGATTGCACTTTTG
CGAGAATTGAAGCACCCTAATGTGATTGCATTGCAGAAGGTGTTCCTTTCTCACAGTGACAGGAAGGTAT
GGCTGCTGTTTGATTATGCAGAGCATGACTTGTGGCATATTATTAAGTTTCACCGTGCATCAAAAGCAAA
TAAAAAGCCCATGCAGTTGCCAAGATCTATGGTTAAATCCTTACTTTACCAGATTCTTGATGGTATCCAT
TACCTCCATGCAAATTGGGTGCTTCACAGAGACTTGAAACCAGCAAATATCCTAGTAATGGGAGAAGGTC
CTGAGAGGGGGAGAGTCAAAATAGCTGACATGGGTTTTGCCAGATTATTCAATTCTCCTCTAAAGCCACT
AGCAGATTTGGATCCAGTAGTTGTGACATTTTGGTATCGGGCTCCAGAACTTTTGCTTGGTGCAAGGCAT
TATACAAAGGCCATTGATATATGGGCAATAGGTTGTATATTTGCTGAATTGTTGACTTCGGAACCTATTT
TTCACTGTCGTCAGGAAGATATAAAAACAAGCAATCCCTTTCATCATGATCAACTGGATCGGATATTTAG
TGTCATGGGGTTTCCTGCAGATAAAGACTGGGAAGATATTAGAAAGATGCCAGAATATCCCACACTTCAA
AAAGACTTTAGAAGAACAACGTATGCCAACAGTAGCCTCATAAAGTACATGGAGAAACACAAGGTCAAGC
CTGACAGCAAAGTGTTCCTCTTGCTTCAGAAACTCCTGACCATGGATCCAACCAAGAGAATTACCTCGGA
GCAAGCTCTGCAGGATCCCTATTTTCAGGAGGACCCTTTGCCAACATTAGATGTATTTGCCGGCTGCCAG
ATTCCATACCCCAAACGAGAATTCCTTAATGAAGATGATCCTGAAGAAAAAGGTGACAAGAATCAGCAAC
AGCAGCAGAACCAGCATCAGCAGCCCACAGCCCCTCCACAGCAGGCAGCAGCCCCTCCACAGGCGCCCCC
ACCACAGCAGAACAGCACCCAGACCAACGGGACCGCAGGTGGGGCTGGGGCCGGGGTCGGGGGCACCGGA
GCAGGGTTGCAGCACAGCCAGGACTCCAGCCTGAACCAGGTGCCTCCAAACAAGAAGCCACGGCTAGGGC
CTTCAGGCGCAAACTCAGGTGGACCTGTGATGCCCTCGGATTATCAGCACTCCAGTTCTCGCCTGAATTA
CCAAAGCAGCGTTCAGGGATCCTCTCAGTCCCAGAGCACACTTGGCTACTCTTCCTCGTCTCAGCAGAGC
TCACAGTACCACCCATCTCACCAGGCCCACCGGTACTGA

Translation (502 aa):
MDYDFKAKLAAERERVEDLFEYEGCKVGRGTYGHVYKARRKDGKDEKEYALKQIEGTGISMSACREIALL
RELKHPNVIALQKVFLSHSDRKVWLLFDYAEHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIH
YLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARH
YTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSVMGFPADKDWEDIRKMPEYPTLQ
KDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQDPYFQEDPLPTLDVFAGCQ
IPYPKREFLNEDDPEEKGDKNQQQQQNQHQQPTAPPQQAAAPPQAPPPQQNSTQTNGTAGGAGAGVGGTG
AGLQHSQDSSLNQVPPNKKPRLGPSGANSGGPVMPSDYQHSSSRLNYQSSVQGSSQSQSTLGYSSSSQQS
SQYHPSHQAHRY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH