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Report for CCDS4931.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
4931.1 Public Homo sapiens 6 CRISP1 24 110 108 CCDS HistoryNCBI Gene:167Re-query CCDS DB by CCDS ID:4931.1Re-query CCDS DB by GeneID:167See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 4931.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000335847.9 ENSP00000338276.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000335847.9Link to Ensembl Protein Viewer:ENSP00000338276.4Re-query CCDS DB by Nucleotide ID:ENST00000335847Re-query CCDS DB by Protein ID:ENSP00000338276
Original member Current member EBI ENST00000505118.1 ENSP00000427589.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000505118.1Link to Ensembl Protein Viewer:ENSP00000427589.1Re-query CCDS DB by Nucleotide ID:ENST00000505118Re-query CCDS DB by Protein ID:ENSP00000427589
Original member Current member NCBI NM_001131.3 NP_001122.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001131.3Link to Protein Sequence:NP_001122.2Re-query CCDS DB by Nucleotide ID:NM_001131Re-query CCDS DB by Protein ID:NP_001122Link to BLAST:NP_001122.2
Original member Current member NCBI NM_001205220.2 NP_001192149.1 Accepted alive Link to Nucleotide Sequence:NM_001205220.2Link to Protein Sequence:NP_001192149.1Re-query CCDS DB by Nucleotide ID:NM_001205220Re-query CCDS DB by Protein ID:NP_001192149Link to BLAST:NP_001192149.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001122.2 249 P54107-1 249 100% 0 0
NP_001192149.1 249 P54107-1 249 100% 0 0

Chromosomal Locations for CCDS 4931.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 49835316 49835443 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 49838437 49838525 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 49840898 49840995 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 49846520 49846668 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 49848209 49848299 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 49852001 49852129 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 49857335 49857400 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (750 nt):
ATGGAAATTAAACACCTCTTGTTTTTGGTTGCTGCTGCTTGCTTACTGCCTATGTTGTCCATGAAAAAGA
AATCAGCTAGAGACCAATTTAATAAGCTCGTCACCGACTTGCCAAATGTACAAGAAGAGATCGTTAATAT
ACACAACGCCCTCAGGAGAAGAGTAGTTCCACCAGCCAGCAACATGCTGAAGATGAGTTGGAGTGAAGAG
GCTGCACAAAATGCCAGAATTTTTTCAAAGTATTGTGATATGACAGAGAGCAACCCCCTTGAGAGGAGAC
TTCCAAATACCTTTTGTGGAGAAAATATGCATATGACATCTTATCCTGTATCATGGTCAAGTGTAATTGG
AGTCTGGTACAGTGAGTCTACAAGTTTCAAACATGGAGAATGGACAACAACGGATGATGACATAACTACT
GACCACTACACTCAGATTGTTTGGGCCACATCTTACCTGATTGGCTGTGCCATTGCATCTTGCCGCCAAC
AAGGATCACCTCGATATCTCTACGTTTGTCACTATTGTCATGAGGGAAATGATCCTGAAACAAAGAATGA
ACCTTATAAGACAGGCGTCCCATGTGAAGCCTGCCCAAGTAACTGTGAAGACAAACTTTGCACTAACCCC
TGCATCTACTATGATGAATACTTCGACTGTGACATACAAGTCCATTATCTGGGATGCAACCACTCAACAA
CTATCCTATTCTGTAAAGCCACTTGTCTGTGTGACACTGAGATAAAATAG

Translation (249 aa):
MEIKHLLFLVAAACLLPMLSMKKKSARDQFNKLVTDLPNVQEEIVNIHNALRRRVVPPASNMLKMSWSEE
AAQNARIFSKYCDMTESNPLERRLPNTFCGENMHMTSYPVSWSSVIGVWYSESTSFKHGEWTTTDDDITT
DHYTQIVWATSYLIGCAIASCRQQGSPRYLYVCHYCHEGNDPETKNEPYKTGVPCEACPSNCEDKLCTNP
CIYYDEYFDCDIQVHYLGCNHSTTILFCKATCLCDTEIK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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