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Report for CCDS47759.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
47759.1 Public Homo sapiens 8 TDRP 24 110 108 CCDS HistoryNCBI Gene:157695Re-query CCDS DB by CCDS ID:47759.1Re-query CCDS DB by GeneID:157695See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 47759.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000324079.11 ENSP00000315111.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000324079.11Link to Ensembl Protein Viewer:ENSP00000315111.6Re-query CCDS DB by Nucleotide ID:ENST00000324079Re-query CCDS DB by Protein ID:ENSP00000315111
Original member Current member NCBI NM_001384899.1 NP_001371828.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001384899.1Link to Protein Sequence:NP_001371828.1Re-query CCDS DB by Nucleotide ID:NM_001384899Re-query CCDS DB by Protein ID:NP_001371828Link to BLAST:NP_001371828.1
Original member Current member NCBI NM_175075.5 NP_778250.2 Accepted alive Link to Nucleotide Sequence:NM_175075.5Link to Protein Sequence:NP_778250.2Re-query CCDS DB by Nucleotide ID:NM_175075Re-query CCDS DB by Protein ID:NP_778250Link to BLAST:NP_778250.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001371828.1 185 Q86YL5-1 185 100% 0 0
NP_778250.2 185 Q86YL5-1 185 100% 0 0

Chromosomal Locations for CCDS 47759.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 492399 492744 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 494494 494597 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 544650 544757 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (558 nt):
ATGTGGAAGCTGGGCCGGGGCCGAGTGCTGCTGGACGAGCCCCCCGAGGAGGAGGACGGCCTGCGTGGGG
GGCCGCCACCGGCCGCCGCCGCCGCCGCCCAGGCGCAGGTTCAGGGAGCAAGTTTCCGAGGTTGGAAAGA
AGTGACTTCACTGTTTAACAAAGATGATGAGCAGCATCTCCTGGAAAGATGTAAATCTCCCAAGTCCAAA
GGAACTAACTTACGATTAAAAGAAGAGTTGAAGGCAGAGAAGAAATCTGGATTTTGGGACAATTTGGTTT
TAAAACAGAATATACAGTCTAAAAAACCAGATGAAATTGAAGGTTGGGAGCCTCCAAAACTTGCTCTTGA
AGACATATCGGCTGACCCTGAGGACACCGTGGGTGGCCACCCATCCTGGTCAGGCTGGGAGGATGACGCC
AAGGGCTCGACCAAGTACACCAGCCTGGCCAGCTCTGCCAACAGCTCCAGGTGGAGCCTGCGCGCGGCAG
GGAGGCTGGTGAGCATCCGACGGCAGAGTAAAGGCCACCTGACAGATAGCCCGGAGGAGGCGGAGTGA

Translation (185 aa):
MWKLGRGRVLLDEPPEEEDGLRGGPPPAAAAAAQAQVQGASFRGWKEVTSLFNKDDEQHLLERCKSPKSK
GTNLRLKEELKAEKKSGFWDNLVLKQNIQSKKPDEIEGWEPPKLALEDISADPEDTVGGHPSWSGWEDDA
KGSTKYTSLASSANSSRWSLRAAGRLVSIRRQSKGHLTDSPEEAE


Links Key
 Links to:   History report
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 Genome Browser Links:   Ensembl Genome Browser
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