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Report for CCDS4737.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
4737.1 Public Homo sapiens 6 ATF6B 24 110 108 CCDS HistoryNCBI Gene:1388Re-query CCDS DB by CCDS ID:4737.1Re-query CCDS DB by GeneID:1388See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 4737.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000375203.8 ENSP00000364349.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000375203.8Link to Ensembl Protein Viewer:ENSP00000364349.3Re-query CCDS DB by Nucleotide ID:ENST00000375203Re-query CCDS DB by Protein ID:ENSP00000364349
Original member Current member NCBI NM_004381.5 NP_004372.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_004381.5Link to Protein Sequence:NP_004372.3Re-query CCDS DB by Nucleotide ID:NM_004381Re-query CCDS DB by Protein ID:NP_004372Link to BLAST:NP_004372.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_004372.3 703 Q99941-1 703 100% 0 0

Chromosomal Locations for CCDS 4737.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 32115739 32115968 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 32116480 32116564 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 32116704 32116815 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 32117037 32117107 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 32117323 32117404 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 32117587 32117694 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 32117859 32118038 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 32118775 32118866 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 32118956 32119141 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 32119824 32119957 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 32120771 32120902 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 32120989 32121124 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 32121263 32121348 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 32126117 32126252 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 32127103 32127194 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 32127442 32127520 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 32127671 32127750 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 32128117 32128207 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2112 nt):
ATGGCGGAGCTGATGCTGCTCAGCGAGATTGCTGACCCGACGCGTTTCTTCACCGACAACCTGCTTAGCC
CGGAGGACTGGGGTCTGCAGAACAGCACCTTGTATTCTGGCCTAGATGAAGTGGCCGAGGAGCAGACGCA
GCTCTTCCGTTGCCCGGAGCAGGATGTCCCGTTTGACGGCAGCTCCCTGGACGTGGGGATGGATGTCAGC
CCCTCTGAGCCCCCATGGGAACTCCTGCCGATCTTCCCAGATCTTCAGGTGAAGTCTGAGCCATCTTCCC
CCTGCTCTTCCTCCTCCCTCAGCTCCGAGTCATCGCGTCTCTCCACAGAGCCATCCAGCGAGGCTCTTGG
GGTAGGGGAGGTGCTCCATGTGAAGACAGAGTCCTTGGCACCCCCACTGTGTCTCCTGGGAGATGACCCA
ACATCCTCATTTGAAACCGTCCAGATCAACGTTATCCCCACCTCTGATGATTCCTCAGATGTCCAGACCA
AGATAGAACCTGTCTCTCCATGTTCTTCCGTCAACTCTGAGGCCTCCCTGCTCTCAGCCGACTCCTCCAG
CCAGGCTTTTATAGGAGAGGAGGTCCTGGAAGTGAAGACAGAGTCCCTGTCCCCTTCAGGATGCCTCCTG
TGGGATGTCCCAGCCCCCTCACTTGGAGCTGTCCAGATCAGCATGGGCCCATCCCTTGATGGCTCCTCAG
GCAAAGCCCTGCCCACCCGGAAGCCGCCACTGCAGCCCAAACCTGTAGTGCTAACCACTGTCCCAATGCC
ATCCAGAGCTGTGCCTCCCAGCACCACAGTCCTTCTGCAGTCCCTCGTCCAGCCACCCCCAGTGTCCCCA
GTTGTCCTCATCCAGGGTGCTATTCGAGTCCAGCCTGAAGGGCCGGCTCCCTCTCTACCACGGCCTGAGA
GGAAGAGCATCGTTCCCGCTCCTATGCCTGGAAACTCCTGCCCGCCTGAAGTGGATGCAAAGCTGCTGAA
GCGGCAGCAGCGAATGATCAAGAACCGGGAGTCAGCCTGCCAGTCCCGGAGAAAGAAGAAAGAGTATCTG
CAGGGACTGGAGGCTCGGCTGCAAGCAGTACTGGCTGACAACCAGCAGCTCCGCCGAGAGAATGCTGCCC
TCCGGCGGCGGCTGGAGGCCCTGCTGGCTGAAAACAGCGAGCTCAAGTTAGGGTCTGGAAACAGGAAGGT
GGTCTGCATCATGGTCTTCCTTCTCTTCATTGCCTTCAACTTTGGACCTGTCAGCATCAGTGAGCCTCCT
TCAGCTCCCATCTCTCCTCGGATGAACAAGGGGGAGCCTCAACCCCGGAGACACTTGCTGGGGTTCTCAG
AGCAAGAGCCAGTTCAGGGAGTTGAACCTCTCCAGGGGTCCTCCCAGGGCCCTAAGGAGCCCCAGCCCAG
CCCCACAGACCAGCCCAGTTTCAGCAACCTGACAGCCTTCCCTGGGGGCGCCAAGGAGCTACTACTAAGA
GACCTAGACCAGCTCTTCCTCTCCTCTGATTGCCGGCACTTCAACCGCACTGAGTCCCTGAGGCTTGCTG
ACGAGTTGAGTGGCTGGGTCCAGCGCCACCAGAGAGGCCGGAGGAAGATCCCTCAGAGGGCCCAGGAGAG
ACAGAAGTCTCAGCCACGGAAGAAGTCACCTCCAGTTAAGGCAGTCCCCATCCAACCCCCTGGACCCCCA
GAAAGGGATTCTGTGGGCCAGCTGCAACTATATCGCCACCCAGACCGTTCGCAGCCAGCATTCTTGGATG
CAATTGACCGACGGGAAGACACATTTTATGTTGTCTCTTTCCGAAGGGACCACCTGCTGCTCCCAGCCAT
CAGCCACAACAAGACCTCCCGGCCCAAGATGTCCCTGGTGATGCCTGCCATGGCCCCCAATGAGACCCTG
TCAGGCCGTGGGGCCCCGGGGGACTATGAGGAGATGATGCAGATCGAGTGTGAGGTCATGGACACCAGGG
TGATTCACATCAAGACCTCCACAGTGCCCCCCTCGCTCCGAAAACAGCCATCCCCAACCCCAGGCAATGC
CACAGGTGGCCCCTTGCCAGTCTCTGCAGCCAGCCAGGCCCACCAGGCCTCCCACCAGCCCCTCTACCTC
AATCATCCCTGA

Translation (703 aa):
MAELMLLSEIADPTRFFTDNLLSPEDWGLQNSTLYSGLDEVAEEQTQLFRCPEQDVPFDGSSLDVGMDVS
PSEPPWELLPIFPDLQVKSEPSSPCSSSSLSSESSRLSTEPSSEALGVGEVLHVKTESLAPPLCLLGDDP
TSSFETVQINVIPTSDDSSDVQTKIEPVSPCSSVNSEASLLSADSSSQAFIGEEVLEVKTESLSPSGCLL
WDVPAPSLGAVQISMGPSLDGSSGKALPTRKPPLQPKPVVLTTVPMPSRAVPPSTTVLLQSLVQPPPVSP
VVLIQGAIRVQPEGPAPSLPRPERKSIVPAPMPGNSCPPEVDAKLLKRQQRMIKNRESACQSRRKKKEYL
QGLEARLQAVLADNQQLRRENAALRRRLEALLAENSELKLGSGNRKVVCIMVFLLFIAFNFGPVSISEPP
SAPISPRMNKGEPQPRRHLLGFSEQEPVQGVEPLQGSSQGPKEPQPSPTDQPSFSNLTAFPGGAKELLLR
DLDQLFLSSDCRHFNRTESLRLADELSGWVQRHQRGRRKIPQRAQERQKSQPRKKSPPVKAVPIQPPGPP
ERDSVGQLQLYRHPDRSQPAFLDAIDRREDTFYVVSFRRDHLLLPAISHNKTSRPKMSLVMPAMAPNETL
SGRGAPGDYEEMMQIECEVMDTRVIHIKTSTVPPSLRKQPSPTPGNATGGPLPVSAASQAHQASHQPLYL
NHP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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