NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS46657.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
46657.1 Public Homo sapiens 21 DIP2A 24 110 108 CCDS HistoryNCBI Gene:23181Re-query CCDS DB by CCDS ID:46657.1Re-query CCDS DB by GeneID:23181See the combined annotation on chromosome 21 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 46657.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000435722.7 ENSP00000415089.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000435722.7Link to Ensembl Protein Viewer:ENSP00000415089.3Re-query CCDS DB by Nucleotide ID:ENST00000435722Re-query CCDS DB by Protein ID:ENSP00000415089
Original member Current member NCBI NM_206890.3 NP_996773.1 Accepted alive Link to Nucleotide Sequence:NM_206890.3Link to Protein Sequence:NP_996773.1Re-query CCDS DB by Nucleotide ID:NM_206890Re-query CCDS DB by Protein ID:NP_996773Link to BLAST:NP_996773.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_996773.1 841 Q14689-2 841 100% 0 0

Chromosomal Locations for CCDS 46657.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 21 (NC_000021.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21See the combined annotation on chromosome 21 in Sequence Viewer

Chromosome Start Stop Links
21 46459132 46459222 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 46484757 46484828 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 46490600 46490719 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 46496988 46497107 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 46498582 46498833 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 46504361 46504489 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 46509257 46509376 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 46511417 46511614 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 46529092 46529183 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 46532127 46532237 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 46533524 46533647 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 46534004 46534113 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 46534585 46534687 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 46537224 46537288 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 46537446 46537539 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 46538483 46538602 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 46539877 46539991 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 46541756 46541895 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 46545137 46545273 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 46545881 46545961 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 46546915 46547046 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2526 nt):
ATGGCTGACCGCGGGTGCCCGCTGGAGGCGGCGCCGCTGCCTGCCGAGGTGCGGGAGAGCCTGGCTGAGC
TGGAGCTGGAGCTGTCGGAAGGTGACATCACTCAAAAAGGATATGAAAAGAAAAGGGCAAAGCTGCTTGC
ACGTTATATACCGCTTATTCAAGGAATAGACCCATCTCTGCAAGCAGAGAATAGAATTCCTGGGCCCTCA
CAAACCACGGCCGCTGCACCCAAGCAGCAGAAGTCTCGGCCCACCGCCTCGAGGGATGAGCGCTTCCGGT
CAGATGTCCACACTGAAGCCGTGCAAGCAGCTTTGGCCAAATACAAAGAGAGGAAGATGCCTATGCCTTC
GAAGAGACGTTCTGTCCTTGTGCATTCGTCTGTGGAAACCTACACCCCTCCAGACACGTCGTCTGCCTCA
GAAGATGAGGGCTCTTTACGGCGACCCGGGCGACTCACCTCCACTCCGCTCCAGAGCCATTCCAGCGTCG
AGCCCTGGCTCGACCGGGTCATTCAGGGCTCGTCCACCTCATCCTCTGCATCCTCCACCTCATCTCACCC
GGGAGGGAGACCCACCACTGCTCCCAGTGCTGCAGCCACGCCGGGGGCCGCCGCTACCACTGCACTCGCA
GGCCTCGAGGCCCACACCCACATAGATCTGCATTCTGCCCCTCCTGATGTCACCACGGGCCTCGTGGAGC
ATTCGTACTTTGAGCGTCCACAGGTGGCTTCTGTGAGAAGTGTTCCTCGGGGGTGCAGCGGGAGCATGCT
GGAAACAGCAGATGGTGTCCCTGTGAACAGCAGAGTGTCCTCCAAAATCCAGCAGCTTCTGAACACCCTG
AAGAGGCCAAAGCGCCCTCCACTGAAGGAGTTCTTTGTGGATGATTTTGAGGAATTGTTGGAAGTTCAGC
AACCAGATCCAAATCAGCCAAAGCCTGAGGGAAGCGAGACGAGTGTGCTGAGAGGGGAGCCTCTCACTGC
AGGTGTCCCCCGACCGCCGTCGCTGTTGGCCACCTTGCAGCGCTGGGGCACAACACAGCCCAAATCCCCC
TGTCTGACTGCCTTGGATACAACTGGGAAAGCCGTCTACACTCTCACCTATGGTAAACTTTGGAGTCGGA
GTTTAAAACTAGCTTATACTCTACTTAATAAACTGACAAGTAAGAATGAACCTCTACTTAAACCTGGAGA
CAGAGTGGCGCTCGTGTTTCCGAATAGTGACCCTGTGATGTTCATGGTTGCATTTTATGGGTGTCTCCTG
GCAGAGCTGGTTCCTGTCCCCATAGAAGTGCCATTAACAAGAAAGGATGCAGGCAGCCAGCAGGTTGGGT
TTCTGCTGGGCAGCTGTGGAGTCTTCTTGGCCCTGACCACAGACGCTTGTCAGAAAGGCCTCCCCAAGGC
ACAGACAGGAGAGGTGGCAGCTTTCAAAGGTTGGCCCCCGCTCTCCTGGCTAGTGATTGATGGGAAGCAT
CTAGCCAAGCCCCCAAAGGACTGGCACCCTCTGGCCCAGGACACAGGGACTGGGACTGCCTACATTGAGT
ATAAAACCAGCAAAGAAGGCAGTACGGTGGGGGTCACAGTGTCCCACGCATCCCTGCTGGCACAGTGCCG
GGCTCTGACCCAGGCGTGCGGGTACTCAGAAGCTGAAACATTAACAAACGTGCTGGATTTCAAAAGGGAT
GCTGGTCTGTGGCATGGCGTGTTAACAAGCGTCATGAACAGGATGCACGTGGTCAGCGTCCCCTACGCGC
TGATGAAGGCGAACCCACTCTCCTGGATCCAGAAAGTGTGCTTCTATAAAGCTCGGGCCGCGCTGGTGAA
GTCGCGAGACATGCACTGGTCTCTCCTAGCTCAGCGGGGCCAGAGGGACGTCAGCCTCAGCTCACTGCGC
ATGCTGATTGTGGCCGATGGTGCCAACCCGTGGTCGATCTCCTCCTGTGACGCCTTCCTCAACGTCTTCC
AGTCCAGAGGTCTGAGGCCAGAGGTCATCTGTCCTTGTGCAAGTTCTCCTGAGGCGCTGACTGTCGCCAT
CCGCAGGCCACCTGATCTGGGAGGACCACCTCCAAGAAAAGCAGTCCTGTCGATGAACGGTCTAAGTTAT
GGTGTTATCAGAGTGGATACTGAAGAAAAGTTGTCAGTCCTTACTGTTCAGGACGTTGGTCAGGTGATGC
CTGGAGCTAATGTATGTGTTGTGAAGTTAGAAGGTACCCCTTATCTTTGTAAAACTGATGAAGTGGGAGA
AATATGCGTCAGTTCCAGTGCAACTGGCACAGCGTACTATGGATTGCTTGGAATCACGAAGAATGTGTTT
GAGGCAGTTCCGGTCACCACAGGAGGAGCACCCATCTTTGACAGGCCATTCACCAGGACAGGCCTGCTGG
GCTTCATCGGGCCTGACAACCTGGTCTTCATCGTGGGCAAACTGGACGGGCTGATGGTCACTGGAGTTCG
CAGACACAATGCAGATGACGTTGTGGCCACCGCACTGGCCGTGGAGCCCATGAAGTTTGTCTACAGAGGC
AGGTGA

Translation (841 aa):
MADRGCPLEAAPLPAEVRESLAELELELSEGDITQKGYEKKRAKLLARYIPLIQGIDPSLQAENRIPGPS
QTTAAAPKQQKSRPTASRDERFRSDVHTEAVQAALAKYKERKMPMPSKRRSVLVHSSVETYTPPDTSSAS
EDEGSLRRPGRLTSTPLQSHSSVEPWLDRVIQGSSTSSSASSTSSHPGGRPTTAPSAAATPGAAATTALA
GLEAHTHIDLHSAPPDVTTGLVEHSYFERPQVASVRSVPRGCSGSMLETADGVPVNSRVSSKIQQLLNTL
KRPKRPPLKEFFVDDFEELLEVQQPDPNQPKPEGSETSVLRGEPLTAGVPRPPSLLATLQRWGTTQPKSP
CLTALDTTGKAVYTLTYGKLWSRSLKLAYTLLNKLTSKNEPLLKPGDRVALVFPNSDPVMFMVAFYGCLL
AELVPVPIEVPLTRKDAGSQQVGFLLGSCGVFLALTTDACQKGLPKAQTGEVAAFKGWPPLSWLVIDGKH
LAKPPKDWHPLAQDTGTGTAYIEYKTSKEGSTVGVTVSHASLLAQCRALTQACGYSEAETLTNVLDFKRD
AGLWHGVLTSVMNRMHVVSVPYALMKANPLSWIQKVCFYKARAALVKSRDMHWSLLAQRGQRDVSLSSLR
MLIVADGANPWSISSCDAFLNVFQSRGLRPEVICPCASSPEALTVAIRRPPDLGGPPPRKAVLSMNGLSY
GVIRVDTEEKLSVLTVQDVGQVMPGANVCVVKLEGTPYLCKTDEVGEICVSSSATGTAYYGLLGITKNVF
EAVPVTTGGAPIFDRPFTRTGLLGFIGPDNLVFIVGKLDGLMVTGVRRHNADDVVATALAVEPMKFVYRG
R


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH