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Report for CCDS46216.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
46216.1 Public Homo sapiens 19 ZNF837 24 110 108 CCDS HistoryNCBI Gene:116412Re-query CCDS DB by CCDS ID:46216.1Re-query CCDS DB by GeneID:116412See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 46216.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000427624.2 ENSP00000405699.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000427624.2Link to Ensembl Protein Viewer:ENSP00000405699.1Re-query CCDS DB by Nucleotide ID:ENST00000427624Re-query CCDS DB by Protein ID:ENSP00000405699
Original member Current member EBI ENST00000597582.2 ENSP00000471478.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000597582.2Link to Ensembl Protein Viewer:ENSP00000471478.1Re-query CCDS DB by Nucleotide ID:ENST00000597582Re-query CCDS DB by Protein ID:ENSP00000471478
Original member Current member NCBI NM_138466.2 NP_612475.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_138466.2Link to Protein Sequence:NP_612475.1Re-query CCDS DB by Nucleotide ID:NM_138466Re-query CCDS DB by Protein ID:NP_612475Link to BLAST:NP_612475.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_612475.1 531 Q96EG3 531 100% 0 0

Chromosomal Locations for CCDS 46216.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 58367737 58369332 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1596 nt):
ATGGAGGCTCCAGCCCAGAAGGCTGGGCAGGGAGGACTCCCCAAGGCCGATGCCCAGGGTGCCTCCGGGG
CCCGGGAGAAGAGGCCCGAGGAGCCGAGGCCCCTCGAAGAGGACCGAGCTGGGAGCCGCCCCACTCAAAA
GGGGGACCTGCGTGGAGCGGCGGGCGGTAGGACGACTCCCCCAGGCGGGGGCTCCCGGGGCTGCAGCCTC
GGGGTGAGCCCCGGCCCGGGGACCCGGCACAGCGCCGGGACCAGACCCCTCGTGCGGGAGCCGTGCGGCC
CCACCTCTTCTCAGAACCCTGAGCTGGTTATCCCCGAGGGGCTGCAAGCCCGGGAGGGCCCCTGTAGGAG
CCCAGCGCGTGGCGGGGACTGCAGCAGGAACTCCTGCCTGGCGTGGCATCGCGGGGCGCCCGCTGGGGAG
ACGCCACCCGTGTGTGACCCCTGTCCGGAGCGGATCCAGAACCACCCCCGGACTCAACTGTGTGAGGTCC
ACACGGACTGTTGGCCGTGCCAACCAGGGACTGGCGCTCCGACCTGCCCGAGGACCCCAAAGCCGACCTC
CCGCGGGAGGAACCCCTTGGTGGAGCAGCCCCGGGCTTGCGCGTGCGGCGAGGCCTTTGCGTGGAGGGCC
CTGCGGATCCCCCAGGAGAGGCTGCAGGCGACGGAGGAGCCCCGTCCGTGTGCCCGGTGCGGGAAGCGCT
TCCGCCCCAACCAGCAGCAGCAGGCGGGCAAGAGTCCCCCAGTGTGTCCTGAGTGCGGCCAAACCTCGCG
ACCTCGCCCTATTGTCCCCGACCCCCCGGCCCAGCGACTGTACGCTTGCGACGAGTGCGGCAAGGCCTTC
ACGCGCACCTCCAGCCTGCTGCAGCACCAGCGCATCCACACGGGCGAGCGGCCCTACGAGTGCGCCGAGT
GCGGCAAGGCCTTCGTGCGCTGCTCCGGCCTGTACCGCCACCAGAAGACGCACTCGGCCGAGCGCCACCG
GCGTGGCCCCGTCCTGGCGCGGCGCGCCTTCCGGCTGGGGTGCCCGCCCTGCGGGGACTACAGCGAGCGG
AGTCCCCGACGGGGGTCGGGAGCCGGGGAGAAGCCGTACGAGTGCGCCGACTGCGCCAAGGCCTTCGGGC
TGTTCTCGCACCTCGTGGAGCACCGGCGCGTGCACACCGGCGAGAAGCCCTACGCGTGCCCCGAGTGCGG
CAAGGCCTTCAACCAGCGCTCGAACCTGAGCCGGCACCAGCGCACTCACAGCAGCGCCAAGCCCTACGCG
TGCCCACTGTGCGAAAAGGCCTTCAAGGGCCGCTCGGGCCTGGTGCAACACCAGCGCGCGCACACCGGCG
AGCGGCCCTATGGCTGCTCCGAGTGCGGAAAGACCTTCCGCGGCTGCTCCGAGCTGCGCCAGCACGAGCG
CCTGCACTCGGGCGAGAAGCCCTACATCTGCCGCGACTGCGGCAAGGCCTTCGTGCGCAACTGCAGCCTG
GTGCGCCACCTGCGCACGCACACGGGCGAGCGGCCCTACGCGTGCGGAGATTGCGGCCGCGCCTTCAGCC
AACGCTCCAACCTCAACGAGCACCGGAAGCGGCACGGGGGCCGCGCCGCGCCTTGA

Translation (531 aa):
MEAPAQKAGQGGLPKADAQGASGAREKRPEEPRPLEEDRAGSRPTQKGDLRGAAGGRTTPPGGGSRGCSL
GVSPGPGTRHSAGTRPLVREPCGPTSSQNPELVIPEGLQAREGPCRSPARGGDCSRNSCLAWHRGAPAGE
TPPVCDPCPERIQNHPRTQLCEVHTDCWPCQPGTGAPTCPRTPKPTSRGRNPLVEQPRACACGEAFAWRA
LRIPQERLQATEEPRPCARCGKRFRPNQQQQAGKSPPVCPECGQTSRPRPIVPDPPAQRLYACDECGKAF
TRTSSLLQHQRIHTGERPYECAECGKAFVRCSGLYRHQKTHSAERHRRGPVLARRAFRLGCPPCGDYSER
SPRRGSGAGEKPYECADCAKAFGLFSHLVEHRRVHTGEKPYACPECGKAFNQRSNLSRHQRTHSSAKPYA
CPLCEKAFKGRSGLVQHQRAHTGERPYGCSECGKTFRGCSELRQHERLHSGEKPYICRDCGKAFVRNCSL
VRHLRTHTGERPYACGDCGRAFSQRSNLNEHRKRHGGRAAP


Links Key
 Links to:   History report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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