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Report for CCDS46087.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
46087.1 Public Homo sapiens 19 CEACAM21 24 110 108 CCDS HistoryNCBI Gene:90273Re-query CCDS DB by CCDS ID:46087.1Re-query CCDS DB by GeneID:90273See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 46087.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000187608.13 ENSP00000187608.9 Accepted alive Link to Ensembl Transcript Viewer:ENST00000187608.13Link to Ensembl Protein Viewer:ENSP00000187608.9Re-query CCDS DB by Nucleotide ID:ENST00000187608Re-query CCDS DB by Protein ID:ENSP00000187608
Original member Current member NCBI NM_033543.6 NP_291021.4 Accepted alive Link to Nucleotide Sequence:NM_033543.6Link to Protein Sequence:NP_291021.4Re-query CCDS DB by Nucleotide ID:NM_033543Re-query CCDS DB by Protein ID:NP_291021Link to BLAST:NP_291021.4

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_291021.4 292 Q3KPI0-2 292 100% 0 0

Chromosomal Locations for CCDS 46087.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 41576275 41576338 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 41577200 41577559 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 41579353 41579628 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 41584350 41584443 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 41585443 41585495 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 41585840 41585871 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (879 nt):
ATGGGGCCCCCCTCAGCTTGTCCCCACAGAGAATGCATCCCCTGGCAGGGGCTCTTGCTCACAGCCTCAC
TTTTAACTTTCTGGAACGCACCCACCACTGCCTGGCTCTTTATTGCATCAGCGCCCTTTGAAGTTGCTGA
AGGGGAGAATGTTCATCTCTCTGTGGTTTATCTGCCCGAGAATCTTTACAGCTATGGCTGGTACAAAGGG
AAAACGGTGGAGCCCAACCAGCTAATCGCAGCATATGTAATAGACACTCACGTTAGGACTCCAGGGCCTG
CATACAGCGGTCGAGAGACAATATCACCCAGTGGAGATCTGCATTTCCAGAACGTCACCCTAGAGGACAC
GGGATACTACAACCTACAAGTCACATACAGAAATTCTCAGATTGAACAGGCATCTCACCATCTCCGTGTA
TACGAGTCAGTGGCTCAGCCCTCCATCCAAGCCAGCAGCACCACAGTCACAGAGAAGGGCTCCGTGGTCC
TGACCTGCCACACAAATAACACTGGAACCTCTTTCCAGTGGATTTTCAACAACCAGCGTCTGCAGGTCAC
GAAGAGGATGAAGCTGTCCTGGTTTAACCATGTGCTCACCATAGACCCCATCAGGCAGGAGGACGCTGGG
GAGTATCAGTGTGAGGTCTCCAACCCAGTCAGCTCCAACAGGAGCGACCCCCTCAAGCTGACTGTAAAAT
ATGACAACACTCTAGGCATCCTGATCGGGGTCCTGGTTGGGAGTCTTCTGGTGGCTGCACTTGTGTGTTT
CCTGCTCCTCCGAAAAACTGGCAGGGCCAGCGATCAGAGTGACTTCAGGGAGCAGCAGCCCCCAGCCTCC
ACCCCCGGCCATGGACCCTCTGACAGCTCCATCTCCTAG

Translation (292 aa):
MGPPSACPHRECIPWQGLLLTASLLTFWNAPTTAWLFIASAPFEVAEGENVHLSVVYLPENLYSYGWYKG
KTVEPNQLIAAYVIDTHVRTPGPAYSGRETISPSGDLHFQNVTLEDTGYYNLQVTYRNSQIEQASHHLRV
YESVAQPSIQASSTTVTEKGSVVLTCHTNNTGTSFQWIFNNQRLQVTKRMKLSWFNHVLTIDPIRQEDAG
EYQCEVSNPVSSNRSDPLKLTVKYDNTLGILIGVLVGSLLVAALVCFLLLRKTGRASDQSDFREQQPPAS
TPGHGPSDSSIS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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