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Report for CCDS46048.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
46048.1 Public Homo sapiens 19 FXYD3 24 110 108 CCDS HistoryNCBI Gene:5349Re-query CCDS DB by CCDS ID:46048.1Re-query CCDS DB by GeneID:5349See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 46048.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000604255.5 ENSP00000473929.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000604255.5Link to Ensembl Protein Viewer:ENSP00000473929.1Re-query CCDS DB by Nucleotide ID:ENST00000604255Re-query CCDS DB by Protein ID:ENSP00000473929
Original member Current member NCBI NM_001136007.2 NP_001129479.1 Accepted alive Link to Nucleotide Sequence:NM_001136007.2Link to Protein Sequence:NP_001129479.1Re-query CCDS DB by Nucleotide ID:NM_001136007Re-query CCDS DB by Protein ID:NP_001129479Link to BLAST:NP_001129479.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001129479.1 144 Q14802-3 144 100% 0 0

Chromosomal Locations for CCDS 46048.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 35117306 35117378 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 35119168 35119251 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 35119363 35119416 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 35121078 35121110 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 35121222 35121245 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 35122765 35122839 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 35122918 35122954 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 35123271 35123308 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 35123441 35123457 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (435 nt):
ATGGGAAGGGGGTATAGTGGGGCCTTGCAGGCCAGAGGTGGCTTGGAGGAGCCCCTGGAAAGAGGCTTAA
GAGGCCCGAGTTTCACCCAGTCCCCACTCCACGGTGCAGCTGCGGCTTATCTCTCAGCCCAGCGAGATGC
CAGCCTTCCTGTCCCGGGCCAGCGCTCTGACATGCAGAAGGTGACCCTGGGCCTGCTTGTGTTCCTGGCA
GGCTTTCCTGTCCTGGACGCCAATGACCTAGAAGATAAAAACAGTCCTTTCTACTATGACTGGCACAGCC
TCCAGGTTGGCGGGCTCATCTGCGCTGGGGTTCTGTGCGCCATGGGCATCATCATCGTCATGAGTGCAAA
ATGCAAATGCAAGTTTGGCCAGAAGTCCGGTCACCATCCAGGGGAGACTCCACCTCTCATCACCCCAGGC
TCAGCCCAAAGCTGA

Translation (144 aa):
MGRGYSGALQARGGLEEPLERGLRGPSFTQSPLHGAAAAYLSAQRDASLPVPGQRSDMQKVTLGLLVFLA
GFPVLDANDLEDKNSPFYYDWHSLQVGGLICAGVLCAMGIIIVMSAKCKCKFGQKSGHHPGETPPLITPG
SAQS


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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