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Report for CCDS45985.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
45985.1 Public Homo sapiens 19 ZNF844 24 110 108 CCDS HistoryNCBI Gene:284391Re-query CCDS DB by CCDS ID:45985.1Re-query CCDS DB by GeneID:284391See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 45985.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000439326.8 ENSP00000392024.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000439326.8Link to Ensembl Protein Viewer:ENSP00000392024.3Re-query CCDS DB by Nucleotide ID:ENST00000439326Re-query CCDS DB by Protein ID:ENSP00000392024
Original member Current member NCBI NM_001136501.3 NP_001129973.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001136501.3Link to Protein Sequence:NP_001129973.1Re-query CCDS DB by Nucleotide ID:NM_001136501Re-query CCDS DB by Protein ID:NP_001129973Link to BLAST:NP_001129973.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001129973.1 666 Q08AG5 666 100% 0 0

Chromosomal Locations for CCDS 45985.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 12064874 12064876 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 12074031 12074157 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 12074361 12074421 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 12075312 12077121 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2001 nt):
ATGGACTTGGTGGCTTTCGAGGATGTGGCTGTGAACTTCACCCAGGAGGAGTGGTCTTTGCTGGATCCTT
CCCAGAAGAATCTCTACAGAGAAGTGATGCAGGAAACCTTGAGGAATCTGGCCTCCATAGGAGAAAAATG
GAAAGACCAGAACATTGAAGATCAGTACAAAAATCCCAGGAATAATCTAAGAAGTCTTCTGGGAGAGAGA
GTTGATGAAAATACAGAAGAAAATCATTGTGGAGAAACTTCTAGCCAGATTCCAGATGACACACTGAACA
AAAAAACTTCTCCTGGAGTAAAATCATGTGAAAGCAGTGTGTGTGGAGAAGTCTTCGTGGGTCATTCTTC
CCTTAATAGGCACATTAGAGCTGACACTGCACACAAGCCGTCTGAGTATCAGGAATATGGACAGGAGCCA
TATAAGTGTCAACAACGTAAGAAAGCCTTCAGATGTCACCCCTCCTTTCAAATGCAAGAAAAGGCTCACA
CTGGAGAAAAACTCTATGATTGTAAAGAATGTGGAAAAACCTTCATATCCCATTCAAGCATTCAAAGACA
CATGATAATGCACAATGGAGATGGAACTTATAAATGTAAGTTTTGTGGGAAAGCCTGCCCTTGTCTCAGC
ATATATCTTATACATGAACGAGTTCACACTGGAGAGAAACCATATAAATGTAAACAATGTGGTAAAGCCT
TTAGTTATTCAACTTCCCTTCAAATACATGAAAGAACTCACACTGGAGAGAAGCCTTATGAATGTAAGGA
ATGTGGGAAAGCATTCGGTAGTCCCAATTCCCTTTATGAACATAGAAGAACTCACACTGGAGAGAAGCCA
TATGAATGCAAACAATGTGGAAAAGCCTTCAGATGGTTCCATTCCTTTCAAATACATGAAAGAACTCACA
GTGAGGAGAAGGCTTATGAATGTACCAAATGTGGGAAAGCATTCAAGTGTCCCAGTTATCTTTGTAGACA
TGAAGTGACCCACTCTGGGAAAAAGCCCTGTGAATGTAAACAATGTGGGAAAGCATTATCTTATCTTAAC
TTTCAAAGACACATGAAAATGCACACTAGAATGAGACCTTATAAATGTAAGACTGTGGAAAAGCCTTTGA
TTCTCCCAGTTCGTTTTGAAGACATGAAAGAACTCACACTGGAGAGAAACCTTATGAATGCAAGCACTGT
GGTAAAGCCTTCAATCGTTCCAGTTCCTTTCACTATCATGAAAGGACTCACACTGGAGAGAAACCCTATG
AATGTAAGCAGTGTAGTAAAGCCTTCATTTCTTCCACTTCCTTTCGATATCATGAAAGGACTCACACTGG
AGAGAAACCGTATGAGTGTAAGCAATGTGGGAAAGCCTTCAGATCTGCCTCACACCTTCAAATGCATGGA
AGGACTCACACTCAAGAGAAACCCTATGAATGTAAGCAGTGTGGTAAAGCCTTCATTTTTTCCACTTCCT
TTCGATATCATGAAAGGACTCACACTGGAGAGAAACCCTATGAGTGTAAGCAATGTGGGAAAGCCTTCAC
ATCTGCCTCACACCTTCAAATGCATGAAAGGACTCACACTGGAAAGCAACTGTATGAATCTAAACAATGT
GAAAAAACCTTTGGATCTGTCAGAAACCTTCAAATTCATGAAAAGACACACCCTGGAGAGAAACCCTATA
AGGAATATGGAAAAGCATTCAACAATTTCTCTTCCTTTCAAATACATGCAACAATGCACAGAGGACAGAA
TGCCTATGAATGTAAAGAGTGTGACAAAGCATTCATATCTGCCAAGATCCTTCGAGTACATGCAAGAACA
CACCCTGGAGAGAAACCCTATGAATGTAAGGAATGCGGAAAAGCGTTCAATTATTTTTCTTCTTTGCGTA
TACACAAAAGGATGCACACTGGAGAGAAACCATATTAATGTAAGGATTGTGGGAAAGCATTCAGTTTGCC
TGGTTCCTTTCGTAGACATAAAAGGGCTCACACTGGAGTGA

Translation (666 aa):
MDLVAFEDVAVNFTQEEWSLLDPSQKNLYREVMQETLRNLASIGEKWKDQNIEDQYKNPRNNLRSLLGER
VDENTEENHCGETSSQIPDDTLNKKTSPGVKSCESSVCGEVFVGHSSLNRHIRADTAHKPSEYQEYGQEP
YKCQQRKKAFRCHPSFQMQEKAHTGEKLYDCKECGKTFISHSSIQRHMIMHNGDGTYKCKFCGKACPCLS
IYLIHERVHTGEKPYKCKQCGKAFSYSTSLQIHERTHTGEKPYECKECGKAFGSPNSLYEHRRTHTGEKP
YECKQCGKAFRWFHSFQIHERTHSEEKAYECTKCGKAFKCPSYLCRHEVTHSGKKPCECKQCGKALSYLN
FQRHMKMHTRMRPYKCKTVEKPLILPVRFEDMKELTLERNLMNASTVVKPSIVPVPFTIMKGLTLERNPM
NVSSVVKPSFLPLPFDIMKGLTLERNRMSVSNVGKPSDLPHTFKCMEGLTLKRNPMNVSSVVKPSFFPLP
FDIMKGLTLERNPMSVSNVGKPSHLPHTFKCMKGLTLESNCMNLNNVKKPLDLSETFKFMKRHTLERNPI
RNMEKHSTISLPFKYMQQCTEDRMPMNVKSVTKHSYLPRSFEYMQEHTLERNPMNVRNAEKRSIIFLLCV
YTKGCTLERNHINVRIVGKHSVCLVPFVDIKGLTLE


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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