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Report for CCDS45724.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
45724.1 Public Homo sapiens 17 TTLL6 24 110 108 CCDS HistoryNCBI Gene:284076Re-query CCDS DB by CCDS ID:45724.1Re-query CCDS DB by GeneID:284076See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 45724.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000393382.8 ENSP00000377043.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000393382.8Link to Ensembl Protein Viewer:ENSP00000377043.3Re-query CCDS DB by Nucleotide ID:ENST00000393382Re-query CCDS DB by Protein ID:ENSP00000377043
Original member Current member NCBI NM_001130918.3 NP_001124390.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001130918.3Link to Protein Sequence:NP_001124390.1Re-query CCDS DB by Nucleotide ID:NM_001130918Re-query CCDS DB by Protein ID:NP_001124390Link to BLAST:NP_001124390.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001124390.1 891 Q8N841-1 891 100% 0 0

Chromosomal Locations for CCDS 45724.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 48768989 48769254 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 48769728 48770097 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 48784923 48785201 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 48786164 48786335 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 48787811 48787999 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 48789931 48790106 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 48791378 48791603 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 48796061 48796146 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 48797061 48797204 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 48799604 48799760 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 48801255 48801385 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 48801525 48801643 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 48803891 48803928 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 48804772 48804991 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 48816970 48817072 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2676 nt):
ATGGGAGCGTTACTCCTTCATCCTTCGAGGAGGGGGCCGGCAGGTGTGGTTGCAAGCTGGACTAGCAGCC
CAGCGGGGCGAGACGGGGGAGTAGGAATTGCGGGGGCCTGGTATTTCCCCAGAGCCTCCTCCCAGGCCAG
GGAGATGCCACAGTGCCCGACTTTGGAAAGCCAGGAAGGGGAAAACTCCGAAGAGAAGGGGGACAGTTCC
AAAGAAGATCCAAAAGAAACCGTCGCGCTGGCTTTTGTGAGAGAGAACCCAGGGGCACAAAACGGACTTC
AGAATGCCCAGCAGCAAGGCAAGAAGAAGAGGAAGAAAAAGAGATTGGTGATCAATCTATCCAGCTGCCG
GTATGAGAGTGTGCGCAGGGCTGCCCAACAGTACGGCTTTAGAGAGGGAGGGGAAGACGATGACTGGACT
CTCTATTGGACAGATTACTCAGTGTCACTGGAGCGGGTGATGGAAATGAAAAGTTACCAGAAGATCAATC
ACTTCCCCGGGATGAGTGAAATCTGCCGGAAGGACTTGCTGGCCAGGAACATGAGCCGCATGTTAAAGAT
GTTCCCTAAAGATTTCCGCTTTTTCCCTAGGACCTGGTGTCTTCCTGCTGACTGGGGAGATTTGCAGACC
TACAGCAGGTCAAGAAAAAATAAGACATACATTTGTAAGCCGGATTCGGGCTGCCAAGGGAAAGGTATAT
TCATCACCCGGACAGTGAAAGAAATCAAACCAGGGGAGGATATGATCTGTCAGCTGTATATTTCAAAGCC
CTTTATCATTGATGGGTTTAAGTTTGACCTACGGATTTATGTACTGGTGACATCCTGTGACCCTCTCAGG
ATTTTTGTGTACAATGAAGGACTGGCCCGCTTTGCGACGACCTCTTACTCCCGCCCTTGCACAGACAACC
TGGATGATATCTGCATGCACCTGACTAATTATTCCATTAATAAGCACAGTTCAAATTTCAGTCGAGATGC
ACACTCTGGCAGTAAGAGGAAGCTCTCCACCTTCAGTGCATACTTGGAGGACCACAGCTACAACGTGGAG
CAGATATGGAGGGATATTGAGGACGTCATCATCAAGACCCTCATCTCGGCCCACCCCATCATCAGGCATA
ACTACCACACCTGCTTCCCCAACCACACACTCAACAGCGCCTGCTTTGAGATCCTGGGCTTTGACATTTT
GTTGGACCACAAACTCAAACCCTGGCTGCTGGAGGTCAACCACTCTCCAAGCTTCTCCACCGACTCTCGG
TTGGATAAAGAGGTGAAAGATGGTCTGCTGTATGACACCTTAGTCCTGATCAACCTGGAAAGCTGTGACA
AGAAGAAAGTCTTGGAGGAGGAGAGACAACGGGGGCAGTTCCTGCAGCAGTGTTGTTCTCGGGAGATGAG
GATTGAGGAAGCCAAGGGTTTCCGGGCCGTGCAGTTAAAGAAAACTGAAACGTATGAGAAGGAAAACTGT
GGAGGGTTCCGACTGATTTATCCCAGTCTGAATTCGGAGAAGTATGAGAAGTTTTTCCAGGACAACAACT
CCCTCTTCCAGAATACTGTTGCTTCCAGGGCTCGGGAGGAGTATGCCCGGCAACTGATCCAGGAGCTGAG
ACTAAAACGGGAGAAAAAGCCCTTCCAAATGAAGAAGAAGGTAGAGATGCAGGGGGAATCGGCAGGCGAG
CAAGTGAGAAAGAAGGGCATGAGGGGCTGGCAACAGAAACAACAGCAGAAAGACAAGGCCGCCACCCAAG
CCTCCAAACAGTACATCCAGCCATTGACATTAGTATCCTACACACCTGACTTGCTCTTGAGTGTCAGAGG
TGAAAGGAAAAATGAAACAGACAGCAGCCTCAACCAGGAGGCTCCCACGGAGGAGGCCAGCTCTGTTTTC
CCCAAGCTGACGTCTGCGAAGCCCTTCAGTTCTCTACCCGATCTGAGGAATATCAATCTCAGCAGCTCGA
AGTTGGAGCCCAGTAAACCCAACTTCAGCATCAAGGAGGCCAAGTCTGCCTCTGCAGTGAACGTATTCAC
TGGCACTGTGCACTTAACCTCCGTAGAAACCACCCCAGAATCCACCACCCAACTCTCAATCTCCCCAAAG
TCTCCGCCAACCCTGGCTGTGACCGCCAGCTCTGAGTACAGTGGCCCAGAGACGGACAGGGTGGTATCCT
TTAAATGCAAGAAGCAGCAGACCCCTCCACACTTAACCCAGAAGAAAATGTTAAAATCTTTTCTGCCCAC
AAAATCCAAGAGCTTCTGGGAGAGTCCGAACACAAACTGGACTTTGCTAAAGAGTGACATGAACAAGCCA
CATTTGATATCCGAGCTACTCACCAAGCTTCAACTGAGTGGGAAGCTCTCCTTCTTCCCAGCTCACTACA
ACCCCAAGCTGGGGATGAATAACCTGTCACAAAACCCCTCCCTGCCTGGGGAGTGCCACTCCCGCAGTGA
CAGCTCTGGCGAGAAGAGGCAGCTGGATGTGTCCTCCCTCCTCTTGCAGAGTCCTCAGAGCTATAATGTT
ACTCTGAGGGACCTGCTGGTGATTGCCACTCCAGCCCAACTGGATCCAAGGCCTTGTAGAAGCCACGCAA
GTGCTATGAGGGACCCATGTATGCAGGATCAAGAAGCATACAGCCATTGCCTGATCTCTGGCCAAAAAGG
ATGTGAGAGGAGCTAG

Translation (891 aa):
MGALLLHPSRRGPAGVVASWTSSPAGRDGGVGIAGAWYFPRASSQAREMPQCPTLESQEGENSEEKGDSS
KEDPKETVALAFVRENPGAQNGLQNAQQQGKKKRKKKRLVINLSSCRYESVRRAAQQYGFREGGEDDDWT
LYWTDYSVSLERVMEMKSYQKINHFPGMSEICRKDLLARNMSRMLKMFPKDFRFFPRTWCLPADWGDLQT
YSRSRKNKTYICKPDSGCQGKGIFITRTVKEIKPGEDMICQLYISKPFIIDGFKFDLRIYVLVTSCDPLR
IFVYNEGLARFATTSYSRPCTDNLDDICMHLTNYSINKHSSNFSRDAHSGSKRKLSTFSAYLEDHSYNVE
QIWRDIEDVIIKTLISAHPIIRHNYHTCFPNHTLNSACFEILGFDILLDHKLKPWLLEVNHSPSFSTDSR
LDKEVKDGLLYDTLVLINLESCDKKKVLEEERQRGQFLQQCCSREMRIEEAKGFRAVQLKKTETYEKENC
GGFRLIYPSLNSEKYEKFFQDNNSLFQNTVASRAREEYARQLIQELRLKREKKPFQMKKKVEMQGESAGE
QVRKKGMRGWQQKQQQKDKAATQASKQYIQPLTLVSYTPDLLLSVRGERKNETDSSLNQEAPTEEASSVF
PKLTSAKPFSSLPDLRNINLSSSKLEPSKPNFSIKEAKSASAVNVFTGTVHLTSVETTPESTTQLSISPK
SPPTLAVTASSEYSGPETDRVVSFKCKKQQTPPHLTQKKMLKSFLPTKSKSFWESPNTNWTLLKSDMNKP
HLISELLTKLQLSGKLSFFPAHYNPKLGMNNLSQNPSLPGECHSRSDSSGEKRQLDVSSLLLQSPQSYNV
TLRDLLVIATPAQLDPRPCRSHASAMRDPCMQDQEAYSHCLISGQKGCERS


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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