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Report for CCDS45477.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
45477.1 Public Homo sapiens 16 TP53TG3B 24 110 108 CCDS HistoryNCBI Gene:729355Re-query CCDS DB by CCDS ID:45477.1Re-query CCDS DB by GeneID:729355See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 45477.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000341305.7 ENSP00000339405.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000341305.7Link to Ensembl Protein Viewer:ENSP00000339405.5Re-query CCDS DB by Nucleotide ID:ENST00000341305Re-query CCDS DB by Protein ID:ENSP00000339405
Original member Current member NCBI NM_001099687.4 NP_001093157.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001099687.4Link to Protein Sequence:NP_001093157.1Re-query CCDS DB by Nucleotide ID:NM_001099687Re-query CCDS DB by Protein ID:NP_001093157Link to BLAST:NP_001093157.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001093157.1 124 Q9ULZ0-2 124 100% 0 0

Chromosomal Locations for CCDS 45477.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 33360909 33361270 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 33362442 33362454 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (375 nt):
ATGCGCGCCTCACCCTGCATCTCCCAGCCCGCAGCCAGCTGGCATCCTAGACCCTCTGCCCTGCGACCAA
CAGCCGGGAGCGGACCAGACACCAGAACTCCCGGAACGGTTGAAGACGGTTCCGCTCCCTGTCCCGCCTT
TCGCAGCCCAGCAGTTTCGCCCTGCGGAGAGGAGCCTTGCTGTTTCCAAATCTCTCCTGCTGAAGAGACA
TTGGAGCTAGGGCGGCTAGTTTCACCTGGTAATTGTGACACCCTGTCTCCTCGAGCTGCAGGCTTTTATG
CTTGTCATGTTCGAAGTTTGATACCTTGCAGATCAACAAAGGGCCGGTGGCCTCTCACTGCCTCCGCGGC
AGGGTTGTCAAGTTTTTCAGGTTAA

Translation (124 aa):
MRASPCISQPAASWHPRPSALRPTAGSGPDTRTPGTVEDGSAPCPAFRSPAVSPCGEEPCCFQISPAEET
LELGRLVSPGNCDTLSPRAAGFYACHVRSLIPCRSTKGRWPLTASAAGLSSFSG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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