NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS45339.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
45339.1 Public Homo sapiens 15 WDR73 24 110 108 CCDS HistoryNCBI Gene:84942Re-query CCDS DB by CCDS ID:45339.1Re-query CCDS DB by GeneID:84942See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 45339.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000434634.7 ENSP00000387982.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000434634.7Link to Ensembl Protein Viewer:ENSP00000387982.3Re-query CCDS DB by Nucleotide ID:ENST00000434634Re-query CCDS DB by Protein ID:ENSP00000387982
Original member Current member NCBI NM_032856.5 NP_116245.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_032856.5Link to Protein Sequence:NP_116245.2Re-query CCDS DB by Nucleotide ID:NM_032856Re-query CCDS DB by Protein ID:NP_116245Link to BLAST:NP_116245.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_116245.2 378 Q6P4I2 378 100% 0 0

Chromosomal Locations for CCDS 45339.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 84643470 84643723 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 84645471 84645836 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 84646184 84646348 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 84647890 84647954 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 84648537 84648625 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 84652714 84652802 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 84653632 84653699 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 84654234 84654274 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1137 nt):
ATGGATCCTGGGGACGACTGGCTGGTGGAATCCTTGCGCTTGTACCAGGATTTCTATGCATTCGACCTGT
CAGGAGCCACTCGAGTCCTTGAATGGATTGATGACAAAGGAGTCTTTGTTGCTGGCTATGAAAGCCTGAA
AAAGAATGAAATTCTTCATCTGAAATTACCTCTCAGACTTTCTGTAAAGGAAAACAAGGGCTTATTCCCA
GAAAGAGATTTCAAAGTGCGCCATGGAGGATTTTCAGACAGGTCTATCTTTGATCTAAAGCATGTGCCAC
ATACCAGATTGCTGGTTACCAGTGGCCTTCCAGGTTGTTATCTGCAGGTGTGGCAGGTTGCAGAGGACAG
TGATGTCATTAAAGCTGTCAGCACCATTGCTGTGCATGAGAAAGAGGAGAGTCTCTGGCCTAGGGTGGCC
GTCTTCTCCACATTGGCACCCGGAGTCCTCCATGGGGCGAGGCTCCGAAGTCTGCAGGTCGTTGATCTGG
AGTCCCGGAAGACCACGTACACCTCAGATGTCAGTGACAGTGAGGAGCTGAGTAGCCTGCAGGTCCTAGA
TGCAGACACCTTTGCCTTCTGCTGTGCTTCAGGCCGGCTGGGGCTTGTTGACACCCGGCAGAAGTGGGCA
CCGTTGGAGAATCGCAGCCCTGGCCCTGGGTCTGGTGGAGAGAGATGGTGTGCTGAAGTTGGGAGCTGGG
GCCAGGGCCCTGGGCCCAGCATTGCCAGCCTTGGCTCAGATGGGCGTCTTTGTCTTCTTGACCCCCGGGA
TCTCTGCCATCCTGTGAGCTCAGTCCAGTGCCCAGTATCCGTACCTAGCCCTGACCCAGAGCTGCTGCGA
GTGACTTGGGCCCCAGGCCTGAAGAATTGCTTGGCCATCTCAGGTTTTGATGGTACAGTCCAGGTCTATG
ATGCCACATCTTGGGATGGAACACGGAGCCAAGATGGAACACGGAGCCAAGTAGAACCTCTCTTCACTCA
CAGAGGTCACATCTTCCTAGATGGAAATGGGATGGACCCTGCTCCTTTGGTCACCACCCACACCTGGCAT
CCCTGCAGACCAAGGACTTTGTTATCAGCAACAAATGATGCCTCTCTGCATGTGTGGGACTGGGTGGACC
TTTGTGCCCCCCGCTGA

Translation (378 aa):
MDPGDDWLVESLRLYQDFYAFDLSGATRVLEWIDDKGVFVAGYESLKKNEILHLKLPLRLSVKENKGLFP
ERDFKVRHGGFSDRSIFDLKHVPHTRLLVTSGLPGCYLQVWQVAEDSDVIKAVSTIAVHEKEESLWPRVA
VFSTLAPGVLHGARLRSLQVVDLESRKTTYTSDVSDSEELSSLQVLDADTFAFCCASGRLGLVDTRQKWA
PLENRSPGPGSGGERWCAEVGSWGQGPGPSIASLGSDGRLCLLDPRDLCHPVSSVQCPVSVPSPDPELLR
VTWAPGLKNCLAISGFDGTVQVYDATSWDGTRSQDGTRSQVEPLFTHRGHIFLDGNGMDPAPLVTTHTWH
PCRPRTLLSATNDASLHVWDWVDLCAPR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH