NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS45325.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
45325.2 Public Homo sapiens 15 GOLGA6L10 24 110 108 CCDS HistoryNCBI Gene:647042Re-query CCDS DB by CCDS ID:45325.2Re-query CCDS DB by GeneID:647042See the combined annotation on chromosome 15 in Sequence Viewer

Public Note for CCDS 45325.1
The coding region has been updated to correct several errors that were present versus the GRCh38 reference genome assembly.

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 45325.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000610657.2 ENSP00000479362.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000610657.2Link to Ensembl Protein Viewer:ENSP00000479362.1Re-query CCDS DB by Nucleotide ID:ENST00000610657Re-query CCDS DB by Protein ID:ENSP00000479362
Original member Current member NCBI NM_001164465.3 NP_001157937.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001164465.3Link to Protein Sequence:NP_001157937.2Re-query CCDS DB by Nucleotide ID:NM_001164465Re-query CCDS DB by Protein ID:NP_001157937Link to BLAST:NP_001157937.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001157937.2 522 A6NI86 522 100% 0 0

Chromosomal Locations for CCDS 45325.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 82342776 82342908 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82343118 82343220 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82344261 82344321 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82344588 82345426 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82345809 82345896 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82346561 82346641 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82346827 82346886 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82347510 82347629 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82349292 82349375 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1569 nt):
ATGTGGCCCCAACCCCGCCTCCCTCCCCACCCCGCGATGTCAGAAAAAACACAACAGGGGAAATTGGCCG
CAGCCAAGAAAAAGTTAAAAGCATATTGGCAGAGGAAGAGCCCTGGCATTCCAGCAGGAGCTAACAGGAA
AAAGAAAGTCAATGGCAGTAGCCCTGACACAGCCACTTCTGGTGGTTACCACTCACCTGGGGATTCAGCA
ACAGGTATCTACGGGGAGGGCCGTGCATCCTCTACTACCCTGCAGGATCTGGAGAGCCAGTACCAAGAAC
TAGCAGTGGCCCTGGATTCAAGCTCCGCAATAATCAGTCAACTCACTGAAAACATCAATTCACTGGTTCG
CACATCTAAGGAGGAGAAGAAGCATGAGATACATCTGGTACAGAAGCTTGGGAGGAGCTTGTTCAAACTC
AAAAACCAGACGGCTGAACCCCTGGCCCCAGAGCCCCCAGCAGGGCCATCTAAGGTGGAGCAGCTACAAG
ATGAGACCAACCACCTAAGGAAGGAGCTAGAGAGTGTGGGAAGACAGCTCCAGGCTGAGGTGGAAAACAA
TCAGATGTTGAGTCTCCTGAACAGGAGACAGGAGGAGAGGCTACGTGAACAGGAGGAGAGGCTACATGAA
CAGGAGGAGAGGCTACATGAACAGGAGGAGAGGCTGTGTGAACAGGAGGAGAGGCTACGTGAACAGGAGG
AGAGGCTGTGTGAACAGGAGGAGAGGCTACGTGAACAGGAGGAGAGGCTGTGTGAACAGGAGGAGAGGCT
ACGTGAACAGGAGGAGAGGCTGTGTGAACAGGAGGAGAGGCTACGTGAACAGGAGGAGAGGCTACGTGAA
CAGGAGGAGAGGCTATGTGAACAGGAGGAGAGGCTGTGTGAACAGGAGGAGAGGCTACGTGAACAGGAGG
AGAGGCTATGTGAACAGGAGGAGAGGCTATGTGAACAGGAGGAGAGGCTGTGTGAACAGGAGAAGCTGCC
AGGGCAGGAGAGGCTGCTGGAAGAGGTGGAGAAGCTGTTAGAACAGGAGAGGCGGCAGGAGGAGCAGGAG
AGGCTGCTGGAGAGGGAGAGGCTGCTGGACGAGGTGGAGGAGCTCCTGGAGCAGGAGAGGCTTCGGCAAC
AGGATGAGAGGCTGTGGCAGCAGGAGACTCTGCGGGAGCTGGAGAGGCTGCGGGAGCTGGAGAGGCTGCG
GGAGCTGGAGAGGATGCTGGAGCTGGGGTGGGAAGCCCTGTACGAGCAGCGGGCCGAGCCACGCAGCGGC
TTCGAGGAGCTGAACAACGAGAACAAGAGCACACTGCAGTTGGAGCAGCAAGTAAAGGAGCTGGAGAAGT
CGGGTGGAGCTGAAGAGCCAAGAGGCTCCGAGTCTGCAGCAGCAGCCAGACCAGTACCTGGAGCCCCAGT
CCCACAAGGAGCTTGGATGTGCGGACAAGCAGGGTGGACTCCCCAGGAGCACCCAGGCTTGAGTGGAGAA
GCTGTTGGTACAGGAGAGGCGGCAGGAGGAGCAGAAGAGGCTGCATGCCATTCTTTTCGGGCTGCGGAGA
ACAGGGAGCTAAACATCACCATCATCTAA

Translation (522 aa):
MWPQPRLPPHPAMSEKTQQGKLAAAKKKLKAYWQRKSPGIPAGANRKKKVNGSSPDTATSGGYHSPGDSA
TGIYGEGRASSTTLQDLESQYQELAVALDSSSAIISQLTENINSLVRTSKEEKKHEIHLVQKLGRSLFKL
KNQTAEPLAPEPPAGPSKVEQLQDETNHLRKELESVGRQLQAEVENNQMLSLLNRRQEERLREQEERLHE
QEERLHEQEERLCEQEERLREQEERLCEQEERLREQEERLCEQEERLREQEERLCEQEERLREQEERLRE
QEERLCEQEERLCEQEERLREQEERLCEQEERLCEQEERLCEQEKLPGQERLLEEVEKLLEQERRQEEQE
RLLERERLLDEVEELLEQERLRQQDERLWQQETLRELERLRELERLRELERMLELGWEALYEQRAEPRSG
FEELNNENKSTLQLEQQVKELEKSGGAEEPRGSESAAAARPVPGAPVPQGAWMCGQAGWTPQEHPGLSGE
AVGTGEAAGGAEEAACHSFRAAENRELNITII


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH