NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS45283.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
45283.1 Public Homo sapiens 15 INTS14 24 110 108 CCDS HistoryNCBI Gene:81556Re-query CCDS DB by CCDS ID:45283.1Re-query CCDS DB by GeneID:81556See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 45283.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000431261.6 ENSP00000402898.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000431261.6Link to Ensembl Protein Viewer:ENSP00000402898.2Re-query CCDS DB by Nucleotide ID:ENST00000431261Re-query CCDS DB by Protein ID:ENSP00000402898
Original member Current member EBI ENST00000420799.7 ENSP00000408429.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000420799.7Link to Ensembl Protein Viewer:ENSP00000408429.3Re-query CCDS DB by Nucleotide ID:ENST00000420799Re-query CCDS DB by Protein ID:ENSP00000408429
Original member NCBI NM_001136043.3 NP_001129515.1 Updated not alive Link to Nucleotide Sequence:NM_001136043.3Link to Protein Sequence:NP_001129515.1Re-query CCDS DB by Nucleotide ID:NM_001136043Re-query CCDS DB by Protein ID:NP_001129515
Current member NCBI NM_001136043.4 NP_001129515.1 Accepted alive Link to Nucleotide Sequence:NM_001136043.4Link to Protein Sequence:NP_001129515.1Re-query CCDS DB by Nucleotide ID:NM_001136043Re-query CCDS DB by Protein ID:NP_001129515Link to BLAST:NP_001129515.1
Original member NCBI NM_001207059.3 NP_001193988.2 Updated not alive Link to Nucleotide Sequence:NM_001207059.3Link to Protein Sequence:NP_001193988.2Re-query CCDS DB by Nucleotide ID:NM_001207059Re-query CCDS DB by Protein ID:NP_001193988
Current member NCBI NM_001207059.4 NP_001193988.2 Accepted alive Link to Nucleotide Sequence:NM_001207059.4Link to Protein Sequence:NP_001193988.2Re-query CCDS DB by Nucleotide ID:NM_001207059Re-query CCDS DB by Protein ID:NP_001193988Link to BLAST:NP_001193988.2
Original member NCBI NM_001366364.2 NP_001353293.1 Updated not alive Link to Nucleotide Sequence:NM_001366364.2Link to Protein Sequence:NP_001353293.1Re-query CCDS DB by Nucleotide ID:NM_001366364Re-query CCDS DB by Protein ID:NP_001353293
Current member NCBI NM_001366364.3 NP_001353293.1 Accepted alive Link to Nucleotide Sequence:NM_001366364.3Link to Protein Sequence:NP_001353293.1Re-query CCDS DB by Nucleotide ID:NM_001366364Re-query CCDS DB by Protein ID:NP_001353293Link to BLAST:NP_001353293.1
Original member NCBI NM_001366365.2 NP_001353294.1 Updated not alive Link to Nucleotide Sequence:NM_001366365.2Link to Protein Sequence:NP_001353294.1Re-query CCDS DB by Nucleotide ID:NM_001366365Re-query CCDS DB by Protein ID:NP_001353294
Current member NCBI NM_001366365.3 NP_001353294.1 Accepted alive Link to Nucleotide Sequence:NM_001366365.3Link to Protein Sequence:NP_001353294.1Re-query CCDS DB by Nucleotide ID:NM_001366365Re-query CCDS DB by Protein ID:NP_001353294Link to BLAST:NP_001353294.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001129515.1 439 Q96SY0-4 439 100% 0 0
NP_001193988.2 439 Q96SY0-4 439 100% 0 0
NP_001353293.1 439 Q96SY0-4 439 100% 0 0
NP_001353294.1 439 Q96SY0-4 439 100% 0 0

Chromosomal Locations for CCDS 45283.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 65579408 65579659 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65581954 65582019 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65584770 65584888 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65591598 65591731 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65593428 65593572 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65595733 65595825 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65598321 65598463 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65598872 65598990 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65599774 65599929 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65605129 65605221 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1320 nt):
ATGGATGATTATGACAAAACCTGCTTGGAGTCTGCATTAGTTGGTGTTTGCAATATCGTTCAGCAAGAAT
GGGGTGGTGCAATTCCTTGCCAGGTTGTCCTGGTGACAGACGGCTGTCTTGGCATTGGTAGAGGGTCACT
GCGACATTCCCTAGCCACTCAAAATCAACGAAGTGAGAGCAACAGGTTTCCACTACCTTTTCCTTTCCCA
TCTAAGTTATATATCATGTGCATGGCGAATTTGGAGGAGCTCCAGAGCACCGATTCCTTGGAATGCCTTG
AACGTCTCATAGATTTAAACAATGGTGAAGGGCAGATTTTTACTATTGATGGCCCCCTGTGCTTGAAGAA
TGTACAGTCTATGTTTGGAAAACTGATAGATTTGGCATATACGCCTTTCCATGCTGTTCTCAAGTGTGGC
CACCTAACTGCTGATGTACAAGTCTTCCCCAGGCCAGAACCTTTTGTTGTAGATGAAGAAATTGATCCTA
TCCCTAAAGTCATTAACACAGATTTGGAAATAGTGGGATTTATTGATATAGCTGATATTTCAAGTCCCCC
AGTTCTGTCCAGACATCTGGTCTTACCTATAGCACTTAACAAAGAAGGTGATGAGGTGGGTACTGGCATC
ACTGATGACAATGAAGATGAAAATTCAGCCAATCAGATTGCAGGCAAAATACCCAACTTTTGTGTCCTGC
TCCATGGTAGCCTAAAAGTGGAAGGAATGGTAGCGATTGTTCAATTAGGTCCTGAATGGCATGGAATGCT
CTACTCCCAAGCTGACAGCAAGAAGAAATCAAACCTCATGATGTCTCTCTTTGAGCCTGGCCCAGAACCT
CTCCCATGGCTAGGGAAAATGGCACAGTTGGGTCCTATTTCAGATGCTAAAGAAAACCCTTATGGCGAGG
ATGACAATAAGAGTCCATTCCCCCTGCAGCCCAAAAACAAACGCAGTTATGCCCAGAATGTGACTGTCTG
GATCAAACCCAGCGGCCTGCAGACAGATGTACAGAAGATTTTAAGAAATGCAAGGAAACTACCTGAAAAA
ACACAGACATTCTATAAGGAGCTGAACCGTTTGCGAAAGGCCGCTCTAGCCTTTGGTTTCCTGGACCTGC
TGAAAGGGGTGGCTGACATGCTGGAAAGGGAATGCACACTGCTGCCTGAGACAGCCCACCCTGATGCTGC
ATTCCAGCTGACCCATGCTGCCCAGCAGCTCAAGCTGGCCAGTACCGGCACCTCTGAGTATGCCGCTTAT
GACCAGAACATCACACCTTTGCACACGGACTTCTCTGGGAGCAGCACTGAAAGAATTTGA

Translation (439 aa):
MDDYDKTCLESALVGVCNIVQQEWGGAIPCQVVLVTDGCLGIGRGSLRHSLATQNQRSESNRFPLPFPFP
SKLYIMCMANLEELQSTDSLECLERLIDLNNGEGQIFTIDGPLCLKNVQSMFGKLIDLAYTPFHAVLKCG
HLTADVQVFPRPEPFVVDEEIDPIPKVINTDLEIVGFIDIADISSPPVLSRHLVLPIALNKEGDEVGTGI
TDDNEDENSANQIAGKIPNFCVLLHGSLKVEGMVAIVQLGPEWHGMLYSQADSKKKSNLMMSLFEPGPEP
LPWLGKMAQLGPISDAKENPYGEDDNKSPFPLQPKNKRSYAQNVTVWIKPSGLQTDVQKILRNARKLPEK
TQTFYKELNRLRKAALAFGFLDLLKGVADMLERECTLLPETAHPDAAFQLTHAAQQLKLASTGTSEYAAY
DQNITPLHTDFSGSSTERI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH