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Report for CCDS45132.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
45132.1 Public Homo sapiens 14 TTC9 24 110 108 CCDS HistoryNCBI Gene:23508Re-query CCDS DB by CCDS ID:45132.1Re-query CCDS DB by GeneID:23508See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 45132.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000256367.3 ENSP00000256367.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000256367.3Link to Ensembl Protein Viewer:ENSP00000256367.2Re-query CCDS DB by Nucleotide ID:ENST00000256367Re-query CCDS DB by Protein ID:ENSP00000256367
Original member Current member NCBI NM_015351.2 NP_056166.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_015351.2Link to Protein Sequence:NP_056166.1Re-query CCDS DB by Nucleotide ID:NM_015351Re-query CCDS DB by Protein ID:NP_056166Link to BLAST:NP_056166.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_056166.1 222 Q92623 222 100% 0 0

Chromosomal Locations for CCDS 45132.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 70642130 70642535 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 70667564 70667746 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 70671076 70671155 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (669 nt):
ATGGAGAGAAAGGGCTCGGCGGCCGGGGCCAAGGGGAACCCGAGCCCGCCCGCGGCCGGAGAGGGGCAGC
GGCCACCGCCGCCGCTGTGCGTCCCGGGCGGCGGCGGAGGAGCCCCAGCGAGGGGCCAGGTCGGGGCGGC
GGCCGAGCCGGCCGAGCTCATCCGACGAGCGCACGAGTTCAAAAGCCAAGGGGCGCAGTGCTACAAGGAC
AAGAAATTCCGTGAAGCCATAGGCAAATACCACCGGGCGTTGCTGGAGCTGAAGGGGCTGCTGCCGCCCC
CCGGGGAACGGGAGCGGGACTCGCGCCCGGCCTCCCCGGCTGGGGCCCTGAAGCCCGGCCGCCTCTCGGA
GGAGCAGAGCAAGACGGTGGAAGCCATCGAGATCGACTGTTACAACAGCCTGGCAGCCTGCCTGCTCCAG
GCTGAGCTGGTAAACTATGAACGAGTCAAGGAATATTGCCTCAAAGTCTTGAAGAAGGAAGGGGAGAACT
TCAAGGCCCTTTACCGGTCTGGTGTGGCCTTCTACCACCTTGGGGACTATGACAAAGCACTCTACTACCT
GAAAGAAGCAAGGACCCAACAACCAACAGACACCAACGTGATTCGGTATATCCAGCTGACGGAGATGAAA
CTCAGCCGATGCTCCCAGAGAGAAAAAGAAGCCATGTAA

Translation (222 aa):
MERKGSAAGAKGNPSPPAAGEGQRPPPPLCVPGGGGGAPARGQVGAAAEPAELIRRAHEFKSQGAQCYKD
KKFREAIGKYHRALLELKGLLPPPGERERDSRPASPAGALKPGRLSEEQSKTVEAIEIDCYNSLAACLLQ
AELVNYERVKEYCLKVLKKEGENFKALYRSGVAFYHLGDYDKALYYLKEARTQQPTDTNVIRYIQLTEMK
LSRCSQREKEAM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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