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Report for CCDS44628.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
44628.1 Public Homo sapiens 11 TMEM223 24 110 108 CCDS HistoryNCBI Gene:79064Re-query CCDS DB by CCDS ID:44628.1Re-query CCDS DB by GeneID:79064See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 44628.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000307366.8 ENSP00000303987.7 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000307366.8Link to Ensembl Protein Viewer:ENSP00000303987.7Re-query CCDS DB by Nucleotide ID:ENST00000307366Re-query CCDS DB by Protein ID:ENSP00000303987
Original member Current member NCBI NM_001080501.3 NP_001073970.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001080501.3Link to Protein Sequence:NP_001073970.1Re-query CCDS DB by Nucleotide ID:NM_001080501Re-query CCDS DB by Protein ID:NP_001073970Link to BLAST:NP_001073970.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001073970.1 202 A0PJW6 202 100% 0 0

Chromosomal Locations for CCDS 44628.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 62790623 62790915 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 62791679 62791994 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (609 nt):
ATGGCGGCGCCTTGGAGGCGATGGCCCACGGGGCTGCTAGCCGTGCTGCGGCCCCTGCTCACCTGCCGGC
CCCTGCAAGGCACGACGCTGCAACGGGATGTGCTGCTCTTTGAGCATGATCGGGGCCGCTTCTTCACCAT
CCTCGGGCTGTTCTGCGCGGGCCAGGGCGTCTTCTGGGCTTCCATGGCTGTGGCAGCCGTGTCCCGGCCC
CCGGTTCCGGTGCAGCCTCTGGATGCGGAGGTCCCAAATCGTGGCCCCTTCGACCTGCGCTCCGCGCTCT
GGCGCTACGGTCTGGCCGTCGGCTGCGGCGCCATCGGAGCCCTCGTACTCGGTGCTGGTCTTCTCTTCTC
TCTCCGGTCTGTGCGCTCAGTGGTGCTTCGAGCTGGAGGGCAGCAGGTGACCCTCACCACTCATGCCCCC
TTTGGCTTGGGGGCCCATTTCACAGTTCCTTTGAAGCAGGTATCTTGCATGGCCCACCGGGGTGAAGTCC
CTGCCATGCTACCTCTGAAAGTCAAAGGCCGACGCTTCTATTTCCTCTTGGACAAAACTGGACACTTCCC
TAACACAAAACTCTTTGACAATACTGTGGGTGCCTACCGGAGCTTGTGA

Translation (202 aa):
MAAPWRRWPTGLLAVLRPLLTCRPLQGTTLQRDVLLFEHDRGRFFTILGLFCAGQGVFWASMAVAAVSRP
PVPVQPLDAEVPNRGPFDLRSALWRYGLAVGCGAIGALVLGAGLLFSLRSVRSVVLRAGGQQVTLTTHAP
FGLGAHFTVPLKQVSCMAHRGEVPAMLPLKVKGRRFYFLLDKTGHFPNTKLFDNTVGAYRSL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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