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Report for CCDS44530.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
44530.1 Public Homo sapiens 11 FHIP1B 24 110 108 CCDS HistoryNCBI Gene:84067Re-query CCDS DB by CCDS ID:44530.1Re-query CCDS DB by GeneID:84067See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 44530.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000449352.7 ENSP00000416918.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000449352.7Link to Ensembl Protein Viewer:ENSP00000416918.3Re-query CCDS DB by Nucleotide ID:ENST00000449352Re-query CCDS DB by Protein ID:ENSP00000416918
Original member Current member NCBI NM_001098794.2 NP_001092264.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001098794.2Link to Protein Sequence:NP_001092264.1Re-query CCDS DB by Nucleotide ID:NM_001098794Re-query CCDS DB by Protein ID:NP_001092264Link to BLAST:NP_001092264.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001092264.1 972 Q8N612-1 972 100% 0 0

Chromosomal Locations for CCDS 44530.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 6211506 6211867 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 6214411 6214573 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 6214733 6214911 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 6217371 6218150 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 6218600 6218763 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 6218971 6219050 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 6222442 6222609 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 6222811 6222897 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 6223080 6223238 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 6223610 6224248 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 6224379 6224516 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2919 nt):
ATGGAGAGGATGAATTGGCTGAGCAGACTGGCCTCCCGGGGCCCTGGGCACCGTATACCTCAAGGGGCCA
ATCTCCAAACCCCAGTCATGGCTGATCCCGAGACCTGCCTCATGGTCTTCAAGAATCACTGGTCCCAGGT
GGTGCGAATCCTGGAGCGGCAAGGCCCTCGGGCAGCTCCTGGGGGTGCAGACGATCTCAGTGCTGTGCGC
AACCACACTTACCAGATGTTGACACTGCTGGCAGAGGACCGTGCAGTTCCCTCGGCCCCCACAGGCCCTG
GGCCCCTGCTGGAGTTTGCTCTGCACGAGGATCTGCTGACCCGTGTGTTGACATGGCAGCTGCAATGGGA
TGAGCTTGGGGATGGGGTCGAGGAACGGCGGGCTGAGCAACTGAAACTATTTGAAATGCTAGTGAGCGAA
GCTCGCCAGCCACTGTTGCGGCATGGTCCAGTTCGTGAGGCTCTGCTCACCCTGCTGGATGCCTGTGGCC
GCCCTGTGCCCAGTAGCCCAGCACTGGATGAAGGCTTGGTGCTACTTCTCAGCCAGCTGTGTGTTTGTGT
GGCCCAGGAGCCTTCATTGCTCGAGTTCTTCCTGCAGCCACCTCCTGAGCCTGGAGCCGCTCCCCGTCTT
CTTCTCTTTTCTCGCCTTGTCCCTTTTGTGCATCGAGAGGGCACCCTGGGCCAGCAGGCCCGTGATGCCC
TACTTCTTCTCATGGCTTTGTCAGCTGGGAGCCCCACTGTGGGCCGCTACATCGCGGATCACTCTTACTT
CTGCCCGGTGCTGGCCACAGGGCTCAGTGCCCTGTACTCATCACTGCCTCGAAAGATTGAGGTTCCAGGG
GATGATTGGCACTGTCTGCGACGGGAAGACTGGCTGGGAGTGCCAGCCCTTGCACTCTTCATGAGTTCCC
TGGAGTTCTGCAATGCAGTAATTCAGGTGGCTCACCCCCTGGTGCAGAAGCAGTTGGTTGATTATATCCA
TAATGGGTTCCTGGTGCCTGTCATGGGTCCTGCCTTGCACAAGACCTCTGTGGAGGAGATGATCGCCAGT
ACCGCCTATCTGGAACTTTTCCTACGGAGTATCTCAGAGCCTGCTTTGCTCCGTACCTTCCTGCGATTCC
TGTTGTTGCACCGGCATGACACCCACACCATCCTCGACACCCTCGTTGCTCGTATTGGCAGTAACTCCCG
GCTCTGCATGGTCTCTCTGAGTCTCTTCAGGACCCTCCTGAACCTCAGCTGTGAGGATGTCCTGCTGCAG
CTGGTTCTCAGGTATCTTGTTCCATGTAACCACGTTATGCTGAGCCAGAAGCCGGCTGTTCGTGATGTGG
ACCTATATGGACGAGCAGCTGACAAGTTTCTCTCCCTAATCCCACGCTGTTGTCGGCACCACGCCCCCAG
CCCACCTCGTCCAGAGCATGCCTCATGGGCACGAGGTCCTGGAAGCCCAAGTGTGGACTCCTCTTCTGTG
ACGACAGTACCCCGGCCCTCCACACCATCTCGTCTGGCTCTCTTCCTGCGGCAGCAGAGCCTGGGTGGCT
CTGAGTCTCCAGGCCCAGCCCCTTGCTCACCAGGGCTTTCTGCATCCCCCGCCTCCAGCCCTGGCCGACG
GCCTACCCCTGCAGAGGAGCCTGGAGAGCTGGAAGACAATTACCTGGAGTATCTGCGTGAGGCACGTCGT
GGTGTGGACCGCTGTGTCCGAGCCTGCCGTACCTGGTCTGCCCCCTATGATGGCGAGCGGCCCTCTCCTG
AGCCCAGTCCTTTTGGCTCCCGGACTAAGAAACGCAGCCTACTGCCTGAGGAGGACAGGAACAACGTGGG
GGAAGGGGAGGAGGAAGAGCTGGGGAGGAGGGGGCGGGCTGGGGGTGCAGGGGAGGGCCCTGGTCACCTG
CCCCCTCCCCAGCTCAATGGAGTGCCAGGATCATGGCCTGAGGGGGCCAAGAAGGTTCGTCTGGTGCCAA
AGGAGGGAGCTGGGGAACTGCTAGAGGGCATCTCCGAGGGCATGGCAGGACTAGAGGGCTTTGGGCAGGA
GCTCCGGGAGCTAGAGGTGGCATTGAGCAATGGGGGAACTGGCTCAGAGTCCCCCTTAGAACCTCCACTG
CCCCTTGAGGAGGAGGAGGCCTACGAGAGCTTCACCTGTCCCCCTGAGCCCCCTGGCCCCTTCCTCAGCA
GCCCTTTGCGGACTCTCAACCAGCTGCCAAGCCAGCCCTTCACTGGCCCCTTCATGGCTGTGCTCTTTGC
CAAACTCGAGAACATGCTGCAGAACTCCGTCTATGTCAACTTCCTGCTGACGGGGCTGGTGGCCCAGCTG
GCCTGTCACCCCCAGCCCCTGCTCCGCTCTTTCCTGCTCAACACCAACATGGTCTTCCAGCCCAGTGTCA
AGTCCCTGCTGCAGGTGCTGGGCTCTGTGAAGAATAAGATTGAGAACTTTGCGGCTTCCCAGGAGGACTT
CCCAGCACTGCTGTCCAAAGCCAAGAAGTACCTCATTGCCCGTGGCAAGTTGGACTGGGCTGAGGGCCCT
GCAGCAGGACCTGCCCCACGCCGTTCTGATCCCCTAGTGAAGAGCCGGAGGCCATCCTTGGGGGAGTTAC
TCCTGCGGCATGCACACAGTCCAACCAGGGCCCGGCAGGCGGCACAATTGGTCCTTCAGCCTGGGCGAGA
CGGAGCAGGACTTGGCCTAAGTGGGGGCTCCCCTGGGGCTTCAACTCCAGTTCTACTCACCCGGGGCGGG
GCCCCTGAACGCCAAGGTGAGGCTCTTCGAGTCAAGAATGCTGTCTACTGTGCAGTCATTTTCCCTGAAT
TTCTCAAGGAGTTGGCTGCCATCTCCCAGGCTCATGCCGTCACCTCGCCTTTCTTGTTGGAGACTTCAGA
GGAAGGATCTGGCCCTCTCATCTCAGGCTGTGGGCCCCTCAATCCTTAA

Translation (972 aa):
MERMNWLSRLASRGPGHRIPQGANLQTPVMADPETCLMVFKNHWSQVVRILERQGPRAAPGGADDLSAVR
NHTYQMLTLLAEDRAVPSAPTGPGPLLEFALHEDLLTRVLTWQLQWDELGDGVEERRAEQLKLFEMLVSE
ARQPLLRHGPVREALLTLLDACGRPVPSSPALDEGLVLLLSQLCVCVAQEPSLLEFFLQPPPEPGAAPRL
LLFSRLVPFVHREGTLGQQARDALLLLMALSAGSPTVGRYIADHSYFCPVLATGLSALYSSLPRKIEVPG
DDWHCLRREDWLGVPALALFMSSLEFCNAVIQVAHPLVQKQLVDYIHNGFLVPVMGPALHKTSVEEMIAS
TAYLELFLRSISEPALLRTFLRFLLLHRHDTHTILDTLVARIGSNSRLCMVSLSLFRTLLNLSCEDVLLQ
LVLRYLVPCNHVMLSQKPAVRDVDLYGRAADKFLSLIPRCCRHHAPSPPRPEHASWARGPGSPSVDSSSV
TTVPRPSTPSRLALFLRQQSLGGSESPGPAPCSPGLSASPASSPGRRPTPAEEPGELEDNYLEYLREARR
GVDRCVRACRTWSAPYDGERPSPEPSPFGSRTKKRSLLPEEDRNNVGEGEEEELGRRGRAGGAGEGPGHL
PPPQLNGVPGSWPEGAKKVRLVPKEGAGELLEGISEGMAGLEGFGQELRELEVALSNGGTGSESPLEPPL
PLEEEEAYESFTCPPEPPGPFLSSPLRTLNQLPSQPFTGPFMAVLFAKLENMLQNSVYVNFLLTGLVAQL
ACHPQPLLRSFLLNTNMVFQPSVKSLLQVLGSVKNKIENFAASQEDFPALLSKAKKYLIARGKLDWAEGP
AAGPAPRRSDPLVKSRRPSLGELLLRHAHSPTRARQAAQLVLQPGRDGAGLGLSGGSPGASTPVLLTRGG
APERQGEALRVKNAVYCAVIFPEFLKELAAISQAHAVTSPFLLETSEEGSGPLISGCGPLNP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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