NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS43119.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
43119.1 Public Homo sapiens 3 FILIP1L 24 110 108 CCDS HistoryNCBI Gene:11259Re-query CCDS DB by CCDS ID:43119.1Re-query CCDS DB by GeneID:11259See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 43119.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000383694.3 ENSP00000373192.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000383694.3Link to Ensembl Protein Viewer:ENSP00000373192.2Re-query CCDS DB by Nucleotide ID:ENST00000383694Re-query CCDS DB by Protein ID:ENSP00000373192
Original member Current member NCBI NM_001370247.1 NP_001357176.1 Accepted alive Link to Nucleotide Sequence:NM_001370247.1Link to Protein Sequence:NP_001357176.1Re-query CCDS DB by Nucleotide ID:NM_001370247Re-query CCDS DB by Protein ID:NP_001357176Link to BLAST:NP_001357176.1
Original member Current member NCBI NM_014890.4 NP_055705.2 Accepted alive Link to Nucleotide Sequence:NM_014890.4Link to Protein Sequence:NP_055705.2Re-query CCDS DB by Nucleotide ID:NM_014890Re-query CCDS DB by Protein ID:NP_055705Link to BLAST:NP_055705.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001357176.1 893 Q4L180-3 893 100% 0 0
NP_055705.2 893 Q4L180-3 893 100% 0 0

Chromosomal Locations for CCDS 43119.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 99848274 99850955 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2682 nt):
ATGGTGGTGGATGAACAGCAAAGGCTGACGGCACAGCTCACCCTTCAAAGACAGAAAATCCAAGAGCTGA
CCACAAATGCAAAGGAAACACATACCAAACTAGCCCTTGCTGAAGCCAGAGTTCAGGAGGAAGAGCAGAA
GGCAACCAGACTAGAGAAGGAACTGCAAACGCAGACCACAAAGTTTCACCAAGACCAAGACACAATTATG
GCGAAGCTCACCAATGAGGACAGTCAAAATCGCCAGCTTCAACAAAAGCTGGCAGCACTCAGCCGGCAGA
TTGATGAGTTAGAAGAGACAAACAGGTCTTTACGAAAAGCAGAAGAGGAGCTGCAAGATATAAAAGAAAA
AATCAGTAAGGGAGAATATGGAAACGCTGGTATCATGGCTGAAGTGGAAGAGCTCAGGAAACGTGTGCTA
GATATGGAAGGGAAAGATGAAGAGCTCATAAAAATGGAGGAGCAGTGCAGAGATCTCAATAAGAGGCTTG
AAAGGGAGACGTTACAGAGTAAAGACTTTAAACTAGAGGTTGAAAAACTCAGTAAAAGAATTATGGCTCT
GGAAAAGTTAGAAGACGCTTTCAACAAAAGCAAACAAGAATGCTACTCTCTGAAATGCAATTTAGAAAAA
GAAAGGATGACCACAAAGCAGTTGTCTCAAGAACTGGAGAGTTTAAAAGTAAGGATCAAAGAGCTAGAAG
CCATTGAAAGTCGGCTAGAAAAGACAGAATTCACTCTAAAAGAGGATTTAACTAAACTGAAAACATTAAC
TGTGATGTTTGTAGATGAACGGAAAACAATGAGTGAAAAATTAAAGAAAACTGAAGATAAATTACAAGCT
GCTTCTTCTCAGCTTCAAGTGGAGCAAAATAAAGTAACAACAGTTACTGAGAAGTTAATTGAGGAAACTA
AAAGGGCGCTCAAGTCCAAAACCGATGTAGAAGAAAAGATGTACAGCGTAACCAAGGAGAGAGATGATTT
AAAAAACAAATTGAAAGCGGAAGAAGAGAAAGGAAATGATCTCCTGTCAAGAGTTAATATGTTGAAAAAT
AGGCTTCAATCATTGGAAGCAATTGAGAAAGATTTCCTAAAAAACAAATTAAATCAAGACTCTGGGAAAT
CCACAACAGCATTACACCAAGAAAACAATAAGATTAAGGAGCTCTCTCAAGAAGTGGAAAGACTGAAACT
GAAGCTAAAGGACATGAAAGCCATTGAGGATGACCTCATGAAAACAGAAGATGAATATGAGACTCTAGAA
CGAAGGTATGCTAATGAACGAGACAAAGCTCAATTTTTATCTAAAGAGCTAGAACATGTTAAAATGGAAC
TTGCTAAGTACAAGTTAGCAGAAAAGACAGAGACCAGCCATGAACAATGGCTTTTCAAAAGGCTTCAAGA
AGAAGAAGCTAAGTCAGGGCACCTCTCAAGAGAAGTGGATGCATTAAAAGAGAAAATTCATGAATACATG
GCAACTGAAGACCTAATATGTCACCTCCAGGGAGATCACTCAGTCCTGCAAAAAAAACTAAATCAACAAG
AAAACAGGAACAGAGATTTAGGAAGAGAGATTGAAAACCTCACTAAGGAGTTAGAGAGGTACCGGCATTT
CAGTAAGAGCCTCAGGCCTAGTCTCAATGGAAGAAGAATTTCCGATCCTCAAGTATTTTCTAAAGAAGTT
CAGACAGAAGCAGTAGACAATGAACCACCTGATTACAAGAGCCTCATTCCTCTGGAACGTGCAGTCATCA
ATGGTCAGTTATATGAGGAGAGTGAGAATCAAGACGAGGACCCTAATGATGAGGGATCTGTGCTGTCCTT
CAAATGCAGCCAGTCTACTCCATGTCCTGTTAACAGAAAGCTATGGATTCCCTGGATGAAATCCAAGGAG
GGCCATCTTCAGAATGGAAAAATGCAAACTAAACCCAATGCCAACTTTGTGCAACCTGGAGATCTAGTCC
TAAGCCACACACCTGGGCAGCCACTTCATATAAAGGTTACTCCAGACCATGTACAAAACACAGCCACTCT
TGAAATCACAAGTCCAACCACAGAGAGTCCTCACTCTTACACGAGTACTGCAGTGATACCGAACTGTGGC
ACGCCAAAGCAAAGGATAACCATCCTCCAAAACGCCTCCATAACACCAGTAAAGTCCAAAACCTCTACCG
AAGACCTCATGAATTTAGAACAAGGCATGTCCCCAATTACCATGGCAACCTTTGCCAGAGCACAGACCCC
AGAGTCTTGTGGTTCTCTAACTCCAGAAAGGACAATGTCCCCTATTCAGGTTTTGGCTGTGACTGGTTCA
GCTAGCTCTCCTGAGCAGGGACGCTCCCCAGAACCAACAGAAATCAGTGCCAAGCATGCGATATTCAGAG
TCTCCCCAGACCGGCAGTCATCATGGCAGTTTCAGCGTTCAAACAGCAATAGCTCAAGTGTGATAACTAC
TGAGGATAATAAAATCCACATTCACTTAGGAAGTCCTTACATGCAAGCTGTAGCCAGCCCTGTGAGACCT
GCCAGCCCTTCAGCACCACTGCAGGATAACCGAACTCAAGGCTTAATTAACGGGGCACTAAACAAAACAA
CCAATAAAGTCACCAGCAGTATTACTATCACACCAACAGCCACACCTCTTCCTCGACAATCACAAATTAC
AGTAAGTAATATATATAACTGA

Translation (893 aa):
MVVDEQQRLTAQLTLQRQKIQELTTNAKETHTKLALAEARVQEEEQKATRLEKELQTQTTKFHQDQDTIM
AKLTNEDSQNRQLQQKLAALSRQIDELEETNRSLRKAEEELQDIKEKISKGEYGNAGIMAEVEELRKRVL
DMEGKDEELIKMEEQCRDLNKRLERETLQSKDFKLEVEKLSKRIMALEKLEDAFNKSKQECYSLKCNLEK
ERMTTKQLSQELESLKVRIKELEAIESRLEKTEFTLKEDLTKLKTLTVMFVDERKTMSEKLKKTEDKLQA
ASSQLQVEQNKVTTVTEKLIEETKRALKSKTDVEEKMYSVTKERDDLKNKLKAEEEKGNDLLSRVNMLKN
RLQSLEAIEKDFLKNKLNQDSGKSTTALHQENNKIKELSQEVERLKLKLKDMKAIEDDLMKTEDEYETLE
RRYANERDKAQFLSKELEHVKMELAKYKLAEKTETSHEQWLFKRLQEEEAKSGHLSREVDALKEKIHEYM
ATEDLICHLQGDHSVLQKKLNQQENRNRDLGREIENLTKELERYRHFSKSLRPSLNGRRISDPQVFSKEV
QTEAVDNEPPDYKSLIPLERAVINGQLYEESENQDEDPNDEGSVLSFKCSQSTPCPVNRKLWIPWMKSKE
GHLQNGKMQTKPNANFVQPGDLVLSHTPGQPLHIKVTPDHVQNTATLEITSPTTESPHSYTSTAVIPNCG
TPKQRITILQNASITPVKSKTSTEDLMNLEQGMSPITMATFARAQTPESCGSLTPERTMSPIQVLAVTGS
ASSPEQGRSPEPTEISAKHAIFRVSPDRQSSWQFQRSNSNSSSVITTEDNKIHIHLGSPYMQAVASPVRP
ASPSAPLQDNRTQGLINGALNKTTNKVTSSITITPTATPLPRQSQITVSNIYN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH