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Report for CCDS42195.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
42195.1 Public Homo sapiens 16 NUDT7 24 110 108 CCDS HistoryNCBI Gene:283927Re-query CCDS DB by CCDS ID:42195.1Re-query CCDS DB by GeneID:283927See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 42195.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000268533.9 ENSP00000268533.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000268533.9Link to Ensembl Protein Viewer:ENSP00000268533.5Re-query CCDS DB by Nucleotide ID:ENST00000268533Re-query CCDS DB by Protein ID:ENSP00000268533
Original member Current member NCBI NM_001105663.3 NP_001099133.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001105663.3Link to Protein Sequence:NP_001099133.1Re-query CCDS DB by Nucleotide ID:NM_001105663Re-query CCDS DB by Protein ID:NP_001099133Link to BLAST:NP_001099133.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001099133.1 238 P0C024-1 238 100% 0 0

Chromosomal Locations for CCDS 42195.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 77722583 77722617 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 77725431 77725584 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 77735828 77735986 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 77741582 77741950 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (717 nt):
ATGTCACGACTTGGTCTTCCCGAGGAGCCAGTCAGAAACAGTTTGCTAGATGATGCTAAGGCCCGCTTAA
GAAAGTATGATATTGGAGGCAAATATTCTCACTTGCCATATAACAAATACTCCGTCCTTTTGCCATTGGT
GGCTAAAGAAGGAAAACTCCATTTGTTGTTCACCGTCCGGTCAGAGAAGCTAAGAAGGGCCCCTGGAGAA
GTTTGCTTCCCTGGAGGTAAGCGTGACCCTACAGACATGGATGATGCAGCCACAGCTCTCCGGGAAGCCC
AGGAGGAAGTGGGTCTCCGTCCTCACCAAGTGGAAGTTGTCTGCTGCCTGGTGCCATGTCTTATTGATAC
AGATACATTGATAACTCCATTTGTGGGTTTAATAGACCACAACTTCCAGGCCCAGCCGAATCCTGCTGAA
GTTAAGGATGTATTCCTGGTGCCTCTGGCCTATTTCCTGCATCCACAGGTCCATGACCAGCATTACGTCA
CACGTCTTGGTCACCGTTTTATTAATCATATCTTTGAGTACACAAACCCTGAAGACGGTGTCACTTACCA
GATCAAGGGAATGACGGCAAACCTTGCAGTGTTGGTGGCCTTTATCATTTTGGAAAAAAAACCCACCTTT
GAGGTTCAATTTAATCTTAATGATGTATTAGCATCCTCTGAAGAGTTATTCCTGAAGGTTCATAAAAAAG
CTACAAGCAGGTTATGA

Translation (238 aa):
MSRLGLPEEPVRNSLLDDAKARLRKYDIGGKYSHLPYNKYSVLLPLVAKEGKLHLLFTVRSEKLRRAPGE
VCFPGGKRDPTDMDDAATALREAQEEVGLRPHQVEVVCCLVPCLIDTDTLITPFVGLIDHNFQAQPNPAE
VKDVFLVPLAYFLHPQVHDQHYVTRLGHRFINHIFEYTNPEDGVTYQIKGMTANLAVLVAFIILEKKPTF
EVQFNLNDVLASSEELFLKVHKKATSRL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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