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Report for CCDS42123.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
42123.1 Public Homo sapiens 16 NOMO3 24 110 108 CCDS HistoryNCBI Gene:408050Re-query CCDS DB by CCDS ID:42123.1Re-query CCDS DB by GeneID:408050See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 42123.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000399336.9 ENSP00000382274.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000399336.9Link to Ensembl Protein Viewer:ENSP00000382274.4Re-query CCDS DB by Nucleotide ID:ENST00000399336Re-query CCDS DB by Protein ID:ENSP00000382274
Original member Current member EBI ENST00000677777.1 ENSP00000504325.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000677777.1Link to Ensembl Protein Viewer:ENSP00000504325.1Re-query CCDS DB by Nucleotide ID:ENST00000677777Re-query CCDS DB by Protein ID:ENSP00000504325
Original member Current member EBI ENST00000676846.1 ENSP00000504575.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000676846.1Link to Ensembl Protein Viewer:ENSP00000504575.1Re-query CCDS DB by Nucleotide ID:ENST00000676846Re-query CCDS DB by Protein ID:ENSP00000504575
Original member Current member NCBI NM_001004067.4 NP_001004067.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001004067.4Link to Protein Sequence:NP_001004067.1Re-query CCDS DB by Nucleotide ID:NM_001004067Re-query CCDS DB by Protein ID:NP_001004067Link to BLAST:NP_001004067.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001004067.1 1222 P69849 1222 100% 0 0

Chromosomal Locations for CCDS 42123.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 16232667 16232831 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 16236901 16236990 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 16239851 16239896 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 16243161 16243261 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 16245068 16245174 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 16247395 16247467 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 16250928 16251080 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 16251963 16252100 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 16252433 16252522 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 16255720 16255825 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 16256008 16256158 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 16261502 16261676 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 16263074 16263215 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 16263513 16263644 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 16265043 16265179 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 16267044 16267131 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 16270121 16270184 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 16270733 16270828 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 16273689 16273907 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 16273993 16274075 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 16275012 16275171 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 16275317 16275443 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 16277370 16277483 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 16278662 16278789 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 16280189 16280330 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 16281239 16281322 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 16283016 16283126 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 16285405 16285506 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 16287743 16287862 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 16293652 16293744 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 16294168 16294299 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3669 nt):
ATGCTGGTGGGCCAGGGCGCGGGGCCGCTGGGGCCCGCGGTGGTCACCGCCGCGGTGGTGCTGCTGCTGA
GCGGCGTGGGGCCGGCGCACGGCTCGGAGGACATCGTGGTGGGCTGCGGTGGCTTCGTCAAGTCGGACGT
GGAGATCAACTACTCTCTCATCGAGATAAAGCTGTACACCAAGCATGGGACTTTGAAATACCAGACAGAC
TGTGCCCCTAATAATGGTTACTTTATGATCCCTTTGTATGATAAGGGGGATTTCATTCTGAAGATTGAGC
CTCCCCTAGGGTGGAGTTTTGAGCCGACGACCGTGGAGCTCCATGTGGATGGAGTCAGTGACATCTGCAC
AAAGGGTGGGGACATCAACTTTGTCTTCACTGGGTTCTCTGTGAATGGCAAGGTCCTCAGCAAAGGGCAG
CCCCTGGGTCCTGCGGGAGTTCAGGTGTCTCTGAGAAACACTGGGACCGAAGCAAAGATCCAGTCCACAG
TTACACAGCCTGGCGGAAAGTTTGCATTTTTTAAAGTTCTGCCTGGAGATTATGAAATCCTCGCAACTCA
TCCAACCTGGGCGTTGAAAGAGGCAAGCACCACAGTGCGTGTAACCAACTCCAATGCCAATGCGGCCAGT
CCCCTCATAGTTGCTGGCTACAATGTGTCTGGCTCTGTCCGAAGTGATGGGGAGCCCATGAAAGGCGTGA
AGTTTCTTCTCTTTTCTTCTTTAGTAACTAAAGAGGATGTCCTGGGCTGCAATGTCTCACCAGTGCCTGG
GTTCCAGCCCCAAGACGAGAGTCTGGTGTATTTGTGCTACACGGTCTCCAGAGAAGATGGCTCGTTCTCT
TTCTATTCCTTGCCAAGTGGGGGCTACACTGTGATTCCGTTCTATCGAGGGGAGAGGATTACCTTTGATG
TGGCGCCTTCCAGACTTGACTTCACAGTGGAGCATGACAGCTTGAAAATCGAGCCCGTGTTCCACGTCAT
GGGATTCTCCGTCACCGGGAGGGTCTTGAACGGACCCGAAGGAGATGGTGTTCCAGAAGCAGTAGTCACC
CTGAATAACCAAATCAAAGTTAAAACAAAAGCTGATGGCTCATTCCGCCTTGAGAACATAACCACAGGGA
CATACACCATCCATGCTCAGAAAGAGCACCTCTACTTTGAAACGGTCACCATCAAAATTGCACCAAACAC
ACCTCAGCTGGCTGACATTGTTGCAACAGGGTTCAGTGTCTGTGGTCAGATATCAATCATTCGCTTCCCC
GACACCGTCAAGCAGATGAATAAATACAAAGTTGTCCTGTCATCTCAAGACAAGGACAAGTCTTTGGTCA
CCGTGGAGACAGATGCTCATGGATCATTTTGTTTTAAAGCAAACCCAGGGACTTACAAAGTGCAGGTGAT
GGTTCCTGAGGCAGAAACCAGAGCAGGGCTGACGTTGAAACCCCAGACATTTCCTCTTACTGTGACCGAC
AGGCCTGTGATGGATGTGGCCTTTGTACAGTTCTTGGCATCAGTTTCTGGGAAAGTCTCTTGTTTGGACA
CCTGTGGTGACTTGCTGGTGACTCTACAGTCCCTGAGCCGCCAGGGTGAGAAGCGGAGCCTCCAGCTCTC
CGGCAAGGTCAACGCCATGACTTTCACCTTTGACAACGTGCTCCCTGGAAAATACAAAATAAGCATCATG
CATGAGGATTGGTGCTGGAAGAACAAGAGCCTGGAGGTGGAAGTGCTGGAGGATGACGTGTCTGCAGTTG
AGTTCAGGCAGACGGGCTACATGCTGAGATGTTCCCTGTCTCACGCCATCACTCTGGAATTTTATCAGGA
TGGAAATGGGCGTGAGAATGTGGGGATTTATAACCTCTCCAAAGGAGTCAACCGATTCTGCCTGTCCAAG
CCTGGTGTGTACAAAGTGACCCCTCGCTCCTGCCACCGGTTTGAGCAAGCGTTCTACACCTATGACACGT
CTTCACCTAGTATCTTGACATTGACAGCCATTCGCCACCATGTCCTTGGAACTATCACCACCGACAAAAT
GATGGATGTCACTGTGACTATCAAGTCTTCCATCGACAGTGAACCCGCCTTGGTCTTAGGCCCTCTGAAG
TCTGTGCAGGAGCTGCGGAGGGAGCAGCAGCTGGCTGAGATCGAGGCCCGCAGGCAGGAGAGGGAGAAAA
ACGGCAATGAGGAAGGTGAAGAAAGAATGACCAAGCCTCCTGTGCAGGAGATGGTAGATGAGTTACAAGG
CCCCTTCTCGTATGATTTCTCTTACTGGGCGCGGTCTGGAGAGAAAATCACTGTTACACCGTCATCTAAA
GAGCTGCTCTTTTATCCCCCTTCAATGGAAGCCGTTGTCAGTGGAGAAAGCTGCCCAGGGAAGCTGATCG
AGATCCACGGGAAGGCAGGCCTGTTTTTAGAAGGCCAGATCCACCCCGAGTTGGAAGGAGTCGAGATTGT
CATCAGTGAAAAGGGGGCAAGTTCACCGCTGATCACAGTCTTTACTGATGACAAAGGTGCCTACAGTGTT
GGCCCCCTGCACAGTGACCTGGAGTACACGGTGACCTCACAGAAGGAGGGCTATGTTCTGACTGCAGTGG
AAGGAACCATCGGAGACTTCAAGGCCTATGCCCTGGCAGGCGTAAGCTTTGAGATAAAAGCTGAGGATGA
CCAGCCCCTCCCGGGAGTCCTCTTATCCCTGAGTGGTGGCCTGTTTCGTTCCAACCTCTTGACCCAGGAC
AACGGCATTCTGACATTCTCAAACCTGAGCCCTGGCCAGTATTACTTCAAACCCATGATGAAGGAGTTCC
GGTTTGAGCCATCCTCACAGATGATCGAGGTGCAGGAAGGCCAGAACCTGAAGATCACCATCACGGGGTA
CCGAACCGCTTACAGTTGCTATGGCACAGTGTCTTCCTTAAACGGAGAGCCCGAACAAGGGGTTGCCATG
GAAGCGGTGGGCCAGAACGACTGCAGCATTTACGGAGAAGACACCGTGACAGACGAAGAGGGCAAGTTCA
GATTACGTGGATTGCTGCCGGGATGTGTGTACCACGTTCAGCTCAAGGCAGAAGGCAACGACCACATTGA
GCGGGCGCTCCCCCACCATAGGGTGATTGAGGTTGGGAATAATGACATCGATGATGTAAACATCATAGTT
TTCCGGCAGATTAATCAATTTGATTTAAGTGGAAATGTGATCACTTCCTCTGAATACCTTCCTACGTTAT
GGGTCAAGCTTTACAAAAGCGAAAACCTCGACAATCCAATCCAGACAGTTTCCCTTGGCCAGTCCCTGTT
CTTCCATTTCCCCCCACTGCTCAGAGATGGCGAGAACTATGTTGTGCTTCTGGACTCCACACTCCCCAGA
TCCCAGTATGACTACATCTTGCCTCAAGTTTCTTTCACCGCAGTGGGCTACCATAAACACATCACCTTGA
TTTTTAATCCCACGAGGAAGCTGCCTGAACAGGACATCGCACAAGGATCCTACATTGCCCTGCCATTGAC
GCTGCTGGTTCTGCTGGCCGGTTACAACCATGACAAGCTCATTCCTTTGCTGCTGCAGTTGACAAGCCGG
CTACAGGGAGTCGGCGCGCTCGGCCAGGCAGCCTCTGACAATAGCGGCCCAGAAGATGCAAAGAGACAAG
CCAAGAAACAGAAGACAAGGCGGACGTGA

Translation (1222 aa):
MLVGQGAGPLGPAVVTAAVVLLLSGVGPAHGSEDIVVGCGGFVKSDVEINYSLIEIKLYTKHGTLKYQTD
CAPNNGYFMIPLYDKGDFILKIEPPLGWSFEPTTVELHVDGVSDICTKGGDINFVFTGFSVNGKVLSKGQ
PLGPAGVQVSLRNTGTEAKIQSTVTQPGGKFAFFKVLPGDYEILATHPTWALKEASTTVRVTNSNANAAS
PLIVAGYNVSGSVRSDGEPMKGVKFLLFSSLVTKEDVLGCNVSPVPGFQPQDESLVYLCYTVSREDGSFS
FYSLPSGGYTVIPFYRGERITFDVAPSRLDFTVEHDSLKIEPVFHVMGFSVTGRVLNGPEGDGVPEAVVT
LNNQIKVKTKADGSFRLENITTGTYTIHAQKEHLYFETVTIKIAPNTPQLADIVATGFSVCGQISIIRFP
DTVKQMNKYKVVLSSQDKDKSLVTVETDAHGSFCFKANPGTYKVQVMVPEAETRAGLTLKPQTFPLTVTD
RPVMDVAFVQFLASVSGKVSCLDTCGDLLVTLQSLSRQGEKRSLQLSGKVNAMTFTFDNVLPGKYKISIM
HEDWCWKNKSLEVEVLEDDVSAVEFRQTGYMLRCSLSHAITLEFYQDGNGRENVGIYNLSKGVNRFCLSK
PGVYKVTPRSCHRFEQAFYTYDTSSPSILTLTAIRHHVLGTITTDKMMDVTVTIKSSIDSEPALVLGPLK
SVQELRREQQLAEIEARRQEREKNGNEEGEERMTKPPVQEMVDELQGPFSYDFSYWARSGEKITVTPSSK
ELLFYPPSMEAVVSGESCPGKLIEIHGKAGLFLEGQIHPELEGVEIVISEKGASSPLITVFTDDKGAYSV
GPLHSDLEYTVTSQKEGYVLTAVEGTIGDFKAYALAGVSFEIKAEDDQPLPGVLLSLSGGLFRSNLLTQD
NGILTFSNLSPGQYYFKPMMKEFRFEPSSQMIEVQEGQNLKITITGYRTAYSCYGTVSSLNGEPEQGVAM
EAVGQNDCSIYGEDTVTDEEGKFRLRGLLPGCVYHVQLKAEGNDHIERALPHHRVIEVGNNDIDDVNIIV
FRQINQFDLSGNVITSSEYLPTLWVKLYKSENLDNPIQTVSLGQSLFFHFPPLLRDGENYVVLLDSTLPR
SQYDYILPQVSFTAVGYHKHITLIFNPTRKLPEQDIAQGSYIALPLTLLVLLAGYNHDKLIPLLLQLTSR
LQGVGALGQAASDNSGPEDAKRQAKKQKTRRT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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