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Report for CCDS41807.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
41807.1 Public Homo sapiens 12 GRIP1 24 110 108 CCDS HistoryNCBI Gene:23426Re-query CCDS DB by CCDS ID:41807.1Re-query CCDS DB by GeneID:23426See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 41807.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000398016.7 ENSP00000381098.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000398016.7Link to Ensembl Protein Viewer:ENSP00000381098.3Re-query CCDS DB by Nucleotide ID:ENST00000398016Re-query CCDS DB by Protein ID:ENSP00000381098
Original member Current member NCBI NM_021150.4 NP_066973.2 Accepted alive Link to Nucleotide Sequence:NM_021150.4Link to Protein Sequence:NP_066973.2Re-query CCDS DB by Nucleotide ID:NM_021150Re-query CCDS DB by Protein ID:NP_066973Link to BLAST:NP_066973.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_066973.2 1076 Q9Y3R0-3 1076 100% 0 0

Chromosomal Locations for CCDS 41807.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 66349019 66349246 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 66353417 66353563 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 66371694 66371927 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 66377017 66377061 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 66377174 66377285 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 66379280 66379436 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 66392308 66392502 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 66392677 66392816 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 66394208 66394352 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 66406283 66406428 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 66420720 66420789 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 66432548 66432628 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 66444584 66444729 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 66445322 66445508 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 66455409 66455564 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 66462924 66463093 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 66465275 66465422 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 66515619 66515764 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 66517901 66517976 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 66529831 66529914 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 66539078 66539223 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 66541815 66541950 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 66596847 66596927 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 66678850 66678904 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3231 nt):
ATGATAGCTGTCTCTTTTAAATGCCGTTGTCAAATTCTGAGGCGACTTACTAAAGATGAGAGTCCCTACA
CTAAATCCGCCAGCCAGACAAAGCCGCCTGATGGAGCGTTGGCTGTGAGGAGACAGAGCATCCCAGAGGA
ATTCAAGGGCTCCACAGTCGTCGAGCTGATGAAGAAGGAAGGCACTACCCTGGGTCTGACGGTATCGGGA
GGAATTGATAAGGATGGCAAGCCAAGAGTATCTAATCTGCGGCAAGGAGGAATTGCTGCTAGAAGTGACC
AGCTGGATGTGGGTGACTACATCAAAGCAGTGAATGGAATCAACCTGGCCAAATTCCGCCATGACGAGAT
CATCAGCTTGCTGAAGAATGTGGGAGAAAGAGTGGTTCTTGAAGTAGAGTACGAGCTTCCACCGGTCTCT
GTGCAAGGATCAAGTGTTATTTTCCGAACAGTGGAGGTCACATTACATAAAGAAGGCAATACCTTTGGTT
TTGTAATTCGAGGGGGAGCACATGATGATAGAAATAAATCTCGTCCAGTTGTGATAACATGTGTTCGTCC
TGGAGGGCCTGCTGACAGAGAGGGCACGATCAAACCCGGTGACAGGTTGCTCAGTGTGGATGGAATTCGG
CTTCTTGGAACTACGCATGCTGAAGCCATGAGTATTCTTAAACAATGTGGACAAGAAGCAGCACTGCTGA
TAGAATATGATGTCTCAGTAATGGACTCTGTGGCAACAGCATCCGGGCCACTACTAGTCGAAGTTGCCAA
AACTCCTGGTGCCAGCCTTGGGGTTGCCCTAACTACCTCGATGTGCTGTAACAAACAAGTCATTGTCATA
GACAAAATCAAATCTGCAAGTATTGCAGACAGATGTGGCGCATTGCATGTGGGAGATCACATCCTCTCCA
TCGATGGAACCAGCATGGAGTACTGTACACTTGCAGAAGCAACCCAGTTCCTGGCCAACACCACTGACCA
GGTCAAGCTTGAGATCCTTCCCCATCATCAGACCCGGCTGGCCCTAAAGGGGCCCGACCATGCAGCTTTG
GTGTCTTCATCCTTCTCTCCTACCTCCATGAGTGCATACAGCCTGAGTTCCCTGAACATGGGGACTCTAC
CTCGAAGCCTCTACTCCACCAGCCCACGTGGAACCATGATGAGGAGGAGACTGAAAAAGAAAGACTTCAA
AAGCTCATTGTCCTTAGCCTCCAGCACAGTAGGATTGGCTGGGCAGGTTGTTCACACAGAAACCACAGAG
GTTGTGCTGACGGCAGATCCTGTCACAGGATTTGGGATCCAACTGCAGGGCAGTGTGTTTGCCACAGAAA
CTCTCTCTTCTCCACCTCTGATTTCCTATATCGAAGCTGACAGCCCAGCAGAGAGATGTGGGGTGCTACA
GATTGGAGACAGAGTGATGGCCATCAATGGAATTCCAACAGAAGACAGCACCTTCGAAGAAGCCAGTCAG
CTCCTCCGAGACTCTTCAATCACGAGCAAGGTCACACTGGAAATCGAGTTTGATGTTGCAGAGTCTGTCA
TCCCAAGTAGTGGAACATTTCATGTAAAGCTGCCTAAGAAGCACAATGTGGAACTTGGAATAACCATAAG
TTCACCATCCAGTAGAAAACCAGGAGACCCCCTCGTCATTTCAGATATCAAGAAAGGGAGTGTGGCACAC
AGAACTGGGACCCTGGAACTTGGGGATAAATTGCTCGCAATAGATAATATCCGGCTGGACAACTGTTCCA
TGGAAGATGCAGTTCAGATCCTCCAGCAATGTGAAGACCTGGTGAAGCTCAAAATCCGCAAAGATGAAGA
TAATTCAGATGAGCAAGAAAGTTCCGGAGCAATTATTTACACCGTGGAGCTTAAACGCTACGGGGGGCCC
CTTGGCATCACAATTTCAGGAACTGAAGAGCCGTTTGATCCTATAATCATTTCAAGCCTCACTAAAGGGG
GATTAGCTGAAAGAACTGGCGCAATCCACATAGGAGACCGAATCCTAGCCATCAATAGCAGCAGCTTGAA
AGGGAAGCCTCTGAGTGAAGCCATCCATTTGTTACAGATGGCAGGAGAGACTGTCACCTTGAAAATTAAG
AAACAGACAGATGCCCAGTCAGCATCGAGCCCCAAGAAGTTCCCTATTTCTAGCCATTTGAGTGACCTGG
GGGATGTGGAGGAGGACTCCTCACCAGCACAGAAGCCAGGCAAGCTCTCCGACATGTACCCCTCCACGGT
GCCCAGTGTGGACAGTGCTGTGGATTCATGGGATGGGTCTGCAATAGACACCAGCTATGGAACTCAAGGC
ACTAGTTTTCAGGCCTCAGGATACAATTTCAACACCTATGACTGGAGGAGTCCAAAACAGAGAGGCAGCT
TGTCCCCAGTCACTAAGCCTCGAAGCCAGACTTACCCAGATGTGGGGCTGAGTTATGAAGACTGGGACCG
GTCCACAGCCAGTGGTTTTGCAGGGGCTGCCGATAGTGCAGAGACAGAACAAGAGGAGAACTTCTGGTCT
CAAGCGCTGGAGGATTTGGAAACCTGCGGACAGTCAGGAATTCTGAGAGAACTGGAGGAGAAAGCTGACA
GGCGTGTGTCTTTGAGAAACATGACTCTCTTGGCAACAATCATGTCGGGGAGCACGATGAGTTTGAATCA
TGAGGCTCCAACACCTCGCAGTCAGCTGGGGCGACAGGCCAGCTTCCAGGAGCGCAGCAGCTCGCGGCCG
CACTACAGCCAAACAACTCGGAGCAACACCCTGCCTTCAGATGTGGGTAGGAAGTCAGTAACCCTGAGAA
AAATGAAACAAGAAATAAAGGAGATCATGTCTCCAACTCCTGTGGAGCTGCACAAGGTGACCTTGTACAA
GGACTCTGACATGGAGGACTTTGGGTTCAGTGTAGCAGATGGCTTACTGGAGAAAGGAGTGTATGTCAAA
AATATTCGCCCAGCTGGGCCAGGAGATCTTGGTGGCTTAAAGCCCTATGACAGGCTCTTACAGGTGAATC
ATGTCCGAACCAGAGACTTTGACTGCTGCCTTGTTGTGCCCCTCATAGCAGAATCCGGGAATAAGCTGGA
CCTGGTTATTAGTAGAAACCCACTGGCTTCACAGAAGTCTATAGACCAACAGAGTCTACCAGGAGATTGG
AGTGAACAGAACAGTGCTTTTTTCCAGCAGCCTAGCCACGGTGGTAATTTGGAGACACGAGAACCCACTA
ATACATTATAG

Translation (1076 aa):
MIAVSFKCRCQILRRLTKDESPYTKSASQTKPPDGALAVRRQSIPEEFKGSTVVELMKKEGTTLGLTVSG
GIDKDGKPRVSNLRQGGIAARSDQLDVGDYIKAVNGINLAKFRHDEIISLLKNVGERVVLEVEYELPPVS
VQGSSVIFRTVEVTLHKEGNTFGFVIRGGAHDDRNKSRPVVITCVRPGGPADREGTIKPGDRLLSVDGIR
LLGTTHAEAMSILKQCGQEAALLIEYDVSVMDSVATASGPLLVEVAKTPGASLGVALTTSMCCNKQVIVI
DKIKSASIADRCGALHVGDHILSIDGTSMEYCTLAEATQFLANTTDQVKLEILPHHQTRLALKGPDHAAL
VSSSFSPTSMSAYSLSSLNMGTLPRSLYSTSPRGTMMRRRLKKKDFKSSLSLASSTVGLAGQVVHTETTE
VVLTADPVTGFGIQLQGSVFATETLSSPPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEEASQ
LLRDSSITSKVTLEIEFDVAESVIPSSGTFHVKLPKKHNVELGITISSPSSRKPGDPLVISDIKKGSVAH
RTGTLELGDKLLAIDNIRLDNCSMEDAVQILQQCEDLVKLKIRKDEDNSDEQESSGAIIYTVELKRYGGP
LGITISGTEEPFDPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQMAGETVTLKIK
KQTDAQSASSPKKFPISSHLSDLGDVEEDSSPAQKPGKLSDMYPSTVPSVDSAVDSWDGSAIDTSYGTQG
TSFQASGYNFNTYDWRSPKQRGSLSPVTKPRSQTYPDVGLSYEDWDRSTASGFAGAADSAETEQEENFWS
QALEDLETCGQSGILRELEEKADRRVSLRNMTLLATIMSGSTMSLNHEAPTPRSQLGRQASFQERSSSRP
HYSQTTRSNTLPSDVGRKSVTLRKMKQEIKEIMSPTPVELHKVTLYKDSDMEDFGFSVADGLLEKGVYVK
NIRPAGPGDLGGLKPYDRLLQVNHVRTRDFDCCLVVPLIAESGNKLDLVISRNPLASQKSIDQQSLPGDW
SEQNSAFFQQPSHGGNLETREPTNTL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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