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Report for CCDS41342.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
41342.2 Public Homo sapiens 1 MROH7 24 110 108 CCDS HistoryNCBI Gene:374977Re-query CCDS DB by CCDS ID:41342.2Re-query CCDS DB by GeneID:374977See the combined annotation on chromosome 1 in Sequence Viewer

Public Note for CCDS 41342.1
The coding region has been updated to represent an alternative splice variant that is supported by the full-length mRNA AK302446.1, and by the homologous rat and mouse proteins (NP_001094435.1 and NP_001119959.1, respectively).

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 41342.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000421030.7 ENSP00000396622.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000421030.7Link to Ensembl Protein Viewer:ENSP00000396622.2Re-query CCDS DB by Nucleotide ID:ENST00000421030Re-query CCDS DB by Protein ID:ENSP00000396622
Original member Current member NCBI NM_001039464.4 NP_001034553.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001039464.4Link to Protein Sequence:NP_001034553.3Re-query CCDS DB by Nucleotide ID:NM_001039464Re-query CCDS DB by Protein ID:NP_001034553Link to BLAST:NP_001034553.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001034553.3 1323 Q68CQ1-7 1323 100% 0 0

Chromosomal Locations for CCDS 41342.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 54652927 54654157 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 54665167 54665240 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 54668854 54668937 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 54670497 54670576 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 54670800 54670929 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 54673091 54673186 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 54673701 54673805 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 54674016 54674151 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 54678742 54678854 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 54679263 54679439 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 54679891 54680045 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 54682656 54682794 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 54686258 54686448 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 54692424 54692561 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 54695376 54695490 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 54700321 54700461 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 54701143 54701322 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 54702090 54702245 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 54702623 54702745 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 54706435 54706537 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 54709014 54709076 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 54709946 54710187 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3972 nt):
ATGGCCCTGAGTCCAGGGGCTAACCTGGTCTTCCATGAAGACCCAAAGATGACACCAAGTCCCCCCTCCT
GTGGGGCCCCGGGATTAGGGTCTGGTACCATCCCTCAGCCCCACCCAGACATGGCTCAGGTGCCTATGTT
GAATCTGCTCCCAAGTCCTGGCTTGGCTCTCGTTCCAGATCTTAATGATTCTTTGAGTCCAGTCTCAGGG
GAGGCCTCAGGCCTGGTGTCTGAAAACACCCCCAGACCTGATGACAGCAGAGCTATCGCTCCAGCCTCCC
TCCAGATCACCAGTTCTTGTTCTGGTGAAGCCCTGGACCTGGATTCCAAGGATGTCTCAAGGCCTGACTC
ACAGGGGCGCCTCTGTCCAGCCTCAAACCCCATTCTGAGCCCTAGCTCTACTGAGGCCCCTCGTCTGAGC
TCTGGGAACCACCCTCAGTCAAATTCTGAAGATGCCTTCAAGTGCCTCTCAAGTAAGATTTTCAAGTTGG
GTCAGAGAAACTCCAACCCTTCTAGGCATGAATTAAACCCATTTATAAGGCACCATTCCAGAGAAGGTCT
GGTTCTGGGCCACTGCATCTCTAGGCCAAGCTCAAAAGCACTCCTTATTCCAACCTCAAACTCTTCTCTG
GACCTTGACTCCAATCCATTGCTCAACATGGGCTCAAGAAACACCTCCAAGCTGAACCTGAATGTAGCTC
CAGATTCTCATGGGACCCTAATCCCAGACACAAATGAGACCATCACTTTGGCTTCACATAATATCTCTGA
GTCTGTTTCAAAAGGAGCCTTTAGTACCACCTGGAGCACAAGTTCAAAGGAAACCATGAATGTGGCTTCC
AGCGGCCACTCCAGATCTGATTTGAGCGTGACCATCACTCAAGCCTCGTATGTGACCCTGATTCCTGGCT
CCAGCTATGGTATCAGCCTGCACTCCAGCACCCATGAGCCCAACTCCACCATCTCTCCACCCTCATGCAT
GACTCTAATCCTGGGTTCCAATGAGACTCTGAGCCTGGACTCCAGCCTCCTGTTCAGCGACACCTCCACC
TTGACGCTGAGCAGTCAGCAGGATGATGCCAAGGACAACAGCATCCACACTGTGCCCCTGGAGGAGAATC
TGGAGAGTTGGAGTGAGATGGCCAGCATTAAGGTGGGCCAGTTCCCGCTGGGATTCCCCATCTCCAACCC
CGCAGGCAAGGACGCCGTGACCTTGCAAGGCATCCCTGAGGGAGCCTTTGATGAAGTGACCTCATGCCTG
GTGAAGGTGCCAGAGAAGACAGAAGGTGGCAACAACATGGCTCTGGTTGAGAATGTCACCACCCTTCAGA
AGAGCCAGGATCTGCTGGAGGCAGAAGGAGAAAAGAAGACCATGATAAAGAAGATTATGAGGCAGATCCA
GGAGGAGCCACTGGATTCTCTCTCAAGCTCCGTCCGCAAGCAGGCCATGGAGATCCTGACCCAGCTGAGC
CACACCCAGCCCACCCTGGGCATGCGGGAGAGGTCGGAGCTGGTGAACGTGTGTGTGCACAGCGTGTTCT
CCCTGCCCTCCGTGCAGGCGATGCAGGAGAAGGACGAGGCCAAGGCTGAGACCATCCAGGCTCTTTACCA
TCAGACCCTGGAGGCCCTGCAGACACTGCTCAAAGCCCTCTTTATCGAGGACCCCACTCCTGCTGGGCTG
AAGAGCATCTTGGAGGCCCTGGGGCCTTGGATGAACTCTGGGAAGGCCCATGAGCGAGCACGGGCTGTGA
ACACCAATGTCTCTGTGTTGAACCACATGCTTCTAACTCTGCCTTTCTTTATGCCCTTGGGGTTCCCGGC
GCTGGGGCTTCTGCTGGGGAGACTCATCCTTCACATTGGGGATCCTGATGAGGAGATTGGCTGTGAGGCT
CTGGACGGCATCATCATCCTCTACACTATTCTGGAGCTCCAAAAACGAGCCAGAGATAAGGAAGAGACCA
ACAAAAAGGAGCTATATGAGAGCAACAAGCATTTCCTGGGGCCCTACAACCCTGTGAGCCCGTGCCAGAA
CATTCTGCGGGTGATCGAGGAATTTGGAGACTTCCTGGGGCCCCAGCAGATAAAGGACCTGCTGCTGGCC
GCCCTGGAAGGGCTGAAAGGCAGCTCAGAGGCTCCAGGGAAGGACTCCAGGGAGATGATGCAGCTGGCCT
CGGAGGTCATGCTCAGCTCGGTGCTGGAGTGGTACCGCCACAGGGCGCTGGAGGTGATCCCAGAAATCAT
GCAAGGCATCTACATGCAGCTGAGCCACATCCAGGAGCCTCGGGCCCGCCAGGTGGCCCTGCTGCCCGTC
TCCCTCCTGGCTAGCTCCTTCATGACCGAGGTTGTGGTGGCCCTGCTCATGTGCCCCCTCCCACTGAACA
GCAATGGAGCAGAGATGTGGAGGCAGCTGATACTGTGTAAGCCCAGCTGTGATGTCCGAGACCTCCTGGA
TCTGCTCCTGGGCAGCCTGAAGGAGAAGCCCGTCACCAAGGAGGGCCGGGCTTCCATCGTGCCCCTGGCG
GCAGCCAGCGGCCTGTGCGAGCTCCTGTCCGTCAACAGCTGCATGGGCCGTGTGAGGCGCATCTACCCTC
AGCTGCTCCTGGCCCTGCTCATTCAGGTCCATTACCACATCGGCCTCAACCTGCCTGGCTGCGTGGCTCC
TCCCAAGGACACCAAGAAGGGTGCACAGCCCTCTCCCTTCGTACCTGTGCGCTGGGTGGTGAAAGTGGTG
AAAACCCTGCTACTGAGGATGGGCTGCTCTTATGAGACCACGTTTCTGGAGGACCAGGGTGGCTGGGAGC
TCATGGAGCAGGTGGAGAGCCACCACCGCGGAGTGGCCTTGCTGGCAAGGGCCATGGTGCAGTACTCCTG
CCAGGAGCTGTGCCGCATCCTCTACCTGCTCATCCCGCTCCTGGAGCGAGGCGACGAGAAGCACAGGATC
ACGGCCACCGCCTTCTTCGTGGAGCTCCTCCAGATGGAGCAGGTGCGCCGGATCCCCGAGGAATACTCTC
TGGGGCGGATGGCAGAAGGCCTGAGCCACCACGACCCCATCATGAAGGTGCTGTCCATTCGAGGCCTGGT
CATCCTGGCCCGCAGGTCTGAGAAGACCGCCAAGGTGAAGGCCCTCCTGCCCTCCATGGTGAAGGGCCTG
AAGAACATGGATGGGATGCTGGTGGTGGAAGCGGTCCACAACCTCAAGGCTGTCTTCAAGGGGCGGGACC
AGAAGCTGATGGACAGTGCGGTCTATGTGGAGATGCTGCAGATCCTGCTGCCGCACTTCAGCGACGCACG
AGAGGTCGTGCGCTCCTCCTGCATCAACCTGTATGGGAAGGTGGTCCAGAAGCTTCGGGCACCACGCACT
CAGGCCATGGAGGAGCAGCTGGTCAGCACCTTGGTGCCCCTACTGCTGACCATGCAGGAGGGCAACTCCA
AGGTAAGCCAGAAGTGTGTGAAGACCCTGTTACGCTGTTCTTACTTCATGGCTTGGGAGTTGCCAAAAAG
AGCTTATAGCCGGAAGCCCTGGGACAACCAACAGCAGACAGTGGCCAAAATTTGCAAGTGCCTTGTGAAC
ACCCACCGAGACAGCGCCTTCATATTCCTCAGCCAGAGCCTGGAGTATGCCAAGAACTCACGGGCCTCCC
TCCGGAAGTGCTCAGTCATGTTCATAGGGTCCCTGGTCCCCTGCATGGAGAGCATAATGACAGAAGATCG
TCTGAATGAAGTGAAAGCTGCTCTGGATAACTTGAGACATGACCCAGAAGCATCAGTGTGCATCTACGCA
GCCCAGGTCCAGGACCACATCCTGGCCAGCTGCTGGCAGAACTCCTGGCTGCCGCACGGGAACTCATGGG
TGTGTTACTCAGCCACCACCCACCGCTGGAGCCCCAGCTGTGAGAACCTGCCCACTTCCCACCAGCGGCG
CTCCTGGATCATGCAGGCACTGGGCTCCTGGAAGATGTCCTTGAAGAAGTGA

Translation (1323 aa):
MALSPGANLVFHEDPKMTPSPPSCGAPGLGSGTIPQPHPDMAQVPMLNLLPSPGLALVPDLNDSLSPVSG
EASGLVSENTPRPDDSRAIAPASLQITSSCSGEALDLDSKDVSRPDSQGRLCPASNPILSPSSTEAPRLS
SGNHPQSNSEDAFKCLSSKIFKLGQRNSNPSRHELNPFIRHHSREGLVLGHCISRPSSKALLIPTSNSSL
DLDSNPLLNMGSRNTSKLNLNVAPDSHGTLIPDTNETITLASHNISESVSKGAFSTTWSTSSKETMNVAS
SGHSRSDLSVTITQASYVTLIPGSSYGISLHSSTHEPNSTISPPSCMTLILGSNETLSLDSSLLFSDTST
LTLSSQQDDAKDNSIHTVPLEENLESWSEMASIKVGQFPLGFPISNPAGKDAVTLQGIPEGAFDEVTSCL
VKVPEKTEGGNNMALVENVTTLQKSQDLLEAEGEKKTMIKKIMRQIQEEPLDSLSSSVRKQAMEILTQLS
HTQPTLGMRERSELVNVCVHSVFSLPSVQAMQEKDEAKAETIQALYHQTLEALQTLLKALFIEDPTPAGL
KSILEALGPWMNSGKAHERARAVNTNVSVLNHMLLTLPFFMPLGFPALGLLLGRLILHIGDPDEEIGCEA
LDGIIILYTILELQKRARDKEETNKKELYESNKHFLGPYNPVSPCQNILRVIEEFGDFLGPQQIKDLLLA
ALEGLKGSSEAPGKDSREMMQLASEVMLSSVLEWYRHRALEVIPEIMQGIYMQLSHIQEPRARQVALLPV
SLLASSFMTEVVVALLMCPLPLNSNGAEMWRQLILCKPSCDVRDLLDLLLGSLKEKPVTKEGRASIVPLA
AASGLCELLSVNSCMGRVRRIYPQLLLALLIQVHYHIGLNLPGCVAPPKDTKKGAQPSPFVPVRWVVKVV
KTLLLRMGCSYETTFLEDQGGWELMEQVESHHRGVALLARAMVQYSCQELCRILYLLIPLLERGDEKHRI
TATAFFVELLQMEQVRRIPEEYSLGRMAEGLSHHDPIMKVLSIRGLVILARRSEKTAKVKALLPSMVKGL
KNMDGMLVVEAVHNLKAVFKGRDQKLMDSAVYVEMLQILLPHFSDAREVVRSSCINLYGKVVQKLRAPRT
QAMEEQLVSTLVPLLLTMQEGNSKVSQKCVKTLLRCSYFMAWELPKRAYSRKPWDNQQQTVAKICKCLVN
THRDSAFIFLSQSLEYAKNSRASLRKCSVMFIGSLVPCMESIMTEDRLNEVKAALDNLRHDPEASVCIYA
AQVQDHILASCWQNSWLPHGNSWVCYSATTHRWSPSCENLPTSHQRRSWIMQALGSWKMSLKK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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