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Report for CCDS34957.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
34957.1 Public Homo sapiens 8 ZNF623 24 110 108 CCDS HistoryNCBI Gene:9831Re-query CCDS DB by CCDS ID:34957.1Re-query CCDS DB by GeneID:9831See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 34957.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000501748.3 ENSP00000445979.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000501748.3Link to Ensembl Protein Viewer:ENSP00000445979.1Re-query CCDS DB by Nucleotide ID:ENST00000501748Re-query CCDS DB by Protein ID:ENSP00000445979
Original member Current member NCBI NM_014789.3 NP_055604.3 Accepted alive Link to Nucleotide Sequence:NM_014789.3Link to Protein Sequence:NP_055604.3Re-query CCDS DB by Nucleotide ID:NM_014789Re-query CCDS DB by Protein ID:NP_055604Link to BLAST:NP_055604.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_055604.3 536 O75123-1 536 100% 0 0

Chromosomal Locations for CCDS 34957.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 143649873 143651483 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1611 nt):
ATGATTTTGTTGTCTTTTGTTTCAGATTCTAATGTAGGAACTGGTGAGAAGAAGGTGACTGAAGCCTGGA
TTTCTGAGGATGAAAACTCACATAGGACGACGTCAGACAGACTCACGGTGATGGAGCTCCCCTCTCCCGA
GTCTGAGGAAGTCCACGAGCCCAGATTAGGGGAGCTCTTGGGAAATCCAGAAGGTCAGAGCCTGGGGAGT
TCCCCCTCTCAGGACAGGGGCTGCAAGCAGGTGACAGTGACCCATTGGAAGATCCAGACAGGAGAGACAG
CTCAAGTGTGCACCAAGTCAGGAAGAAACCATATTCTGAACTCAGACCTTCTTCTGCTTCAGAGAGAGCT
CATAGAGGGGGAAGCCAATCCTTGCGATATCTGTGGCAAAACCTTCACGTTTAATTCGGACCTAGTTAGG
CATCGGATTTCGCATGCTGGGGAGAAACCTTACACGTGCGATCAGTGTGGGAAAGGCTTTGGCCAGAGCT
CACACCTTATGGAGCATCAGAGAATTCACACTGGAGAGAGACTCTACGTCTGTAATGTGTGTGGGAAAGA
CTTCATTCACTATTCAGGTCTCATTGAGCATCAGCGCGTTCATTCAGGAGAAAAGCCCTTCAAATGTGCG
CAGTGTGGGAAGGCGTTTTGTCACAGTTCAGACCTGATTAGGCACCAGAGAGTTCACACCAGAGAGAGAC
CTTTTGAATGCAAAGAGTGTGGGAAAGGCTTCAGTCAGAGCTCCTTACTTATTCGCCATCAGAGGATTCA
CACGGGAGAAAGGCCCTATGAGTGCAATGAATGTGGGAAATCCTTCATAAGGAGCTCGAGCCTCATTCGC
CATTATCAGATCCACACAGAAGTGAAACAGTATGAATGCAAAGAATGTGGGAAGGCATTCCGTCATCGCT
CAGACCTTATTGAACACCAGAGAATTCACACCGGAGAGAGACCCTTTGAATGCAATGAGTGTGGGAAAGC
CTTTATTCGGAGTTCAAAGCTCATTCAGCATCAGAGGATCCATACTGGGGAGAGGCCTTACGTATGCAAT
GAGTGTGGGAAGCGCTTCAGCCAGACGTCAAACTTCACCCAGCATCAGAGAATTCACACTGGAGAGAAAC
TCTATGAATGTAACGAGTGTGGGAAAGCTTTCTTTCTGAGTTCATACCTTATTCGACACCAGAAAATCCA
CACTGGAGAGAGAGTGTATGAATGTAAGGAATGTGGGAAAGCGTTTCTCCAGAAAGCCCATCTCACTGAG
CACCAGAAGATCCACTCTGGGGACAGGCCCTTCGAATGTAAAGACTGTGGGAAAGCCTTCATCCAGAGCT
CCAAGCTGCTTCTGCACCAGATTATTCACACTGGAGAAAAGCCCTATGTGTGCAGTTATTGTGGGAAAGG
CTTTATTCAGAGGTCAAACTTCCTTCAACACCAGAAAATTCATACTGAAGAGAAGCTCTATGAATGTAGT
CAGTATGGGAGAGATTTTAACTCAACTACAAACGTTAAAAATAATCAAAGGGTTCACCAAGAGGGACTCT
CCTTGAGTAAGGCCCCCATACATTTGGGTGAGAGGTCTGTAGATAAGGGGGAACACACAGGTAACTTATA
A

Translation (536 aa):
MILLSFVSDSNVGTGEKKVTEAWISEDENSHRTTSDRLTVMELPSPESEEVHEPRLGELLGNPEGQSLGS
SPSQDRGCKQVTVTHWKIQTGETAQVCTKSGRNHILNSDLLLLQRELIEGEANPCDICGKTFTFNSDLVR
HRISHAGEKPYTCDQCGKGFGQSSHLMEHQRIHTGERLYVCNVCGKDFIHYSGLIEHQRVHSGEKPFKCA
QCGKAFCHSSDLIRHQRVHTRERPFECKECGKGFSQSSLLIRHQRIHTGERPYECNECGKSFIRSSSLIR
HYQIHTEVKQYECKECGKAFRHRSDLIEHQRIHTGERPFECNECGKAFIRSSKLIQHQRIHTGERPYVCN
ECGKRFSQTSNFTQHQRIHTGEKLYECNECGKAFFLSSYLIRHQKIHTGERVYECKECGKAFLQKAHLTE
HQKIHSGDRPFECKDCGKAFIQSSKLLLHQIIHTGEKPYVCSYCGKGFIQRSNFLQHQKIHTEEKLYECS
QYGRDFNSTTNVKNNQRVHQEGLSLSKAPIHLGERSVDKGEHTGNL


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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