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Report for CCDS34591.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
34591.1 Public Homo sapiens 7 FOXK1 24 110 108 CCDS HistoryNCBI Gene:221937Re-query CCDS DB by CCDS ID:34591.1Re-query CCDS DB by GeneID:221937See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 34591.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000328914.5 ENSP00000328720.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000328914.5Link to Ensembl Protein Viewer:ENSP00000328720.4Re-query CCDS DB by Nucleotide ID:ENST00000328914Re-query CCDS DB by Protein ID:ENSP00000328720
Original member Current member NCBI NM_001037165.2 NP_001032242.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001037165.2Link to Protein Sequence:NP_001032242.1Re-query CCDS DB by Nucleotide ID:NM_001037165Re-query CCDS DB by Protein ID:NP_001032242Link to BLAST:NP_001032242.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001032242.1 733 P85037-1 733 100% 0 0

Chromosomal Locations for CCDS 34591.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 4682309 4682868 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 4740838 4741023 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 4754459 4754615 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 4755237 4755383 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 4756994 4757187 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 4759051 4759217 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 4759311 4759595 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 4761064 4761288 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 4762184 4762464 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2202 nt):
ATGGCCGAAGTCGGCGAGGACAGCGGCGCCCGCGCCCTGCTCGCGCTGCGCTCGGCGCCCTGCAGCCCAG
TGCTGTGCGCCGCAGCCGCCGCCGCCGCCTTCCCCGCGGCCGCACCCCCGCCGGCCCCCGCGCAGCCCCA
GCCTCCGCCCGGGCCGCCGCCGCCGCCGCCACCGCCGCTGCCTCCGGGCGCGATCGCGGGCGCGGGCTCC
TCCGGGGGCTCCTCCGGGGTATCCGGGGACTCCGCGGTCGCGGGCGCGGCGCCGGCCCTGGTGGCCGCGG
CGGCCGCCTCGGTACGGCAGAGCCCGGGGCCGGCGCTGGCGCGGCTGGAGGGCCGCGAGTTCGAGTTCCT
CATGCGCCAGCCCAGCGTCACCATCGGCCGCAACTCGTCGCAGGGCTCGGTGGACTTGAGCATGGGCCTG
TCCAGCTTCATCTCGCGGCGCCACCTGCAGCTCAGCTTCCAGGAGCCGCACTTCTACCTGCGCTGCCTCG
GCAAGAACGGCGTCTTCGTGGACGGGGCCTTCCAGAGACGCGGCGCGCCCGCCCTGCAGCTGCCCAAGCA
GTGTACCTTCCGGTTTCCCAGCACGGCCATCAAGATCCAGTTCACGTCGCTCTATCACAAAGAAGAGGCC
CCAGCCTCCCCGCTGCGGCCACTGTACCCCCAGATCTCCCCTCTGAAGATCCACATCCCGGAGCCGGACC
TCCGGAGCATGGTCAGCCCCGTCCCCTCCCCGACGGGCACCATCAGTGTCCCCAACTCCTGCCCAGCCAG
TCCACGCGGTGCCGGCTCCTCCAGTTACCGCTTTGTGCAGAACGTGACCTCGGACCTGCAGCTGGCAGCA
GAGTTTGCAGCAAAGGCCGCGTCGGAGCAGCAGGCAGACACGTCTGGAGGAGACAGCCCCAAGGATGAGT
CAAAGCCGCCGTTCTCCTACGCGCAGCTGATCGTGCAGGCCATCTCCTCCGCCCAGGACCGGCAGCTGAC
CCTGAGCGGGATCTACGCCCACATCACCAAGCATTACCCCTACTACCGGACGGCCGACAAAGGCTGGCAG
AATTCTATCCGGCACAACCTCTCTTTGAACCGTTACTTTATCAAAGTCCCACGTTCCCAGGAGGAGCCTG
GGAAGGGGTCCTTTTGGCGAATAGACCCTGCCTCTGAAGCCAAGCTCGTGGAACAGGCATTCCGGAAACG
GAGGCAGAGGGGTGTCTCCTGCTTCCGCACCCCCTTCGGGCCTCTGTCCTCAAGGAGCGCTCCAGCTTCG
CCCACACACCCCGGGCTGATGTCCCCTCGCTCCGGCGGCCTGCAGACCCCAGAGTGCCTGTCTCGGGAGG
GCTCCCCCATTCCACACGACCCTGAGTTTGGGTCCAAGTTAGCTTCTGTCCCAGAGTACCGGTATTCCCA
AAGCGCACCCGGCTCCCCCGTCAGCGCCCAGCCAGTGATCATGGCCGTGCCTCCCCGACCGTCCAGCCTC
GTGGCCAAGCCCGTGGCCTACATGCCCGCCTCCATCGTAACCTCACAGCAGCCCGCGGGCCACGCCATCC
ACGTCGTGCAGCAGGCCCCCACCGTCACCATGGTCAGGGTGGTCACCACATCTGCCAACTCGGCCAACGG
ATACATCCTCACCAGCCAGGGCGCGGCGGGGGGCTCCCATGATGCGGCGGGCGCAGCCGTGCTGGACCTG
GGCAGCGAGGCCAGAGGCCTGGAGGAGAAACCCACCATTGCGTTTGCCACAATCCCCGCGGCTGGTGGAG
TCATCCAGACGGTGGCCAGCCAGATGGCCCCCGGGGTCCCCGGACACACGGTCACCATCCTGCAGCCCGC
CACACCCGTGACCCTCGGGCAGCACCACCTTCCAGTCCGGGCCGTGACCCAGAACGGAAAGCATGCGGTT
CCCACGAACAGTTTAGCCGGCAACGCTTACGCCCTCACCAGCCCTTTGCAGCTCCTTGCGACCCAAGCGA
GTTCATCCGCGCCGGTGGTGGTCACCCGGGTGTGCGAGGTGGGGCCCAAGGAGCCAGCAGCAGCCGTCGC
GGCCACGGCCACCACCACCCCAGCCACTGCCACCACCGCCTCTGCCTCCGCCTCTTCCACTGGAGAGCCC
GAGGTCAAAAGGTCCCGGGTGGAGGAGCCCAGTGGTGCTGTAACCACACCGGCTGGAGTGATCGCAGCTG
CCGGCCCCCAGGGGCCAGGCACCGGGGAGTGA

Translation (733 aa):
MAEVGEDSGARALLALRSAPCSPVLCAAAAAAAFPAAAPPPAPAQPQPPPGPPPPPPPPLPPGAIAGAGS
SGGSSGVSGDSAVAGAAPALVAAAAASVRQSPGPALARLEGREFEFLMRQPSVTIGRNSSQGSVDLSMGL
SSFISRRHLQLSFQEPHFYLRCLGKNGVFVDGAFQRRGAPALQLPKQCTFRFPSTAIKIQFTSLYHKEEA
PASPLRPLYPQISPLKIHIPEPDLRSMVSPVPSPTGTISVPNSCPASPRGAGSSSYRFVQNVTSDLQLAA
EFAAKAASEQQADTSGGDSPKDESKPPFSYAQLIVQAISSAQDRQLTLSGIYAHITKHYPYYRTADKGWQ
NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASEAKLVEQAFRKRRQRGVSCFRTPFGPLSSRSAPAS
PTHPGLMSPRSGGLQTPECLSREGSPIPHDPEFGSKLASVPEYRYSQSAPGSPVSAQPVIMAVPPRPSSL
VAKPVAYMPASIVTSQQPAGHAIHVVQQAPTVTMVRVVTTSANSANGYILTSQGAAGGSHDAAGAAVLDL
GSEARGLEEKPTIAFATIPAAGGVIQTVASQMAPGVPGHTVTILQPATPVTLGQHHLPVRAVTQNGKHAV
PTNSLAGNAYALTSPLQLLATQASSSAPVVVTRVCEVGPKEPAAAVAATATTTPATATTASASASSTGEP
EVKRSRVEEPSGAVTTPAGVIAAAGPQGPGTGE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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