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Report for CCDS34058.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
34058.1 Public Homo sapiens 4 ADAD1 24 110 108 CCDS HistoryNCBI Gene:132612Re-query CCDS DB by CCDS ID:34058.1Re-query CCDS DB by GeneID:132612See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 34058.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000296513.7 ENSP00000296513.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000296513.7Link to Ensembl Protein Viewer:ENSP00000296513.2Re-query CCDS DB by Nucleotide ID:ENST00000296513Re-query CCDS DB by Protein ID:ENSP00000296513
Original member Current member NCBI NM_139243.4 NP_640336.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_139243.4Link to Protein Sequence:NP_640336.1Re-query CCDS DB by Nucleotide ID:NM_139243Re-query CCDS DB by Protein ID:NP_640336Link to BLAST:NP_640336.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_640336.1 576 Q96M93-1 576 100% 0 0

Chromosomal Locations for CCDS 34058.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 4 (NC_000004.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 122380070 122380241 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 122380992 122381180 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 122383799 122383966 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 122393589 122393657 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 122396252 122396377 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 122407908 122408031 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 122411222 122411392 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 122412580 122412809 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 122415379 122415616 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 122421261 122421390 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 122429626 122429739 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1731 nt):
ATGGCTAGCAACAATCATTGGTTTCAGAGTTCGCAGGTCCCCAGCTTTGCCCAGATGCTGAAAAAGAACC
TGCCAGTTCAACCAGCGACAAAGACGATAACTACACCCACAGGATGGTCCTCAGAAAGTTACGGCCTGTC
CAAGATGGCATCCAAGGTTACGCAAGTAACGGGTAATTTTCCAGAGCCGTTGCTTTCCAAGAATCTTTCA
TCTATTTCAAATCCTGTCCTTCCTCCAAAAAAAATACCTAAGGAATTTATAATGAAATACAAACGTGGAG
AGATAAATCCTGTGTCAGCCTTGCACCAGTTTGCACAAATGCAGCGAGTTCAGCTTGACCTTAAGGAAAC
TGTGACAACAGGTAATGTTATGGGACCATATTTTGCCTTTTGTGCTGTGGTGGATGGTATTCAGTACAAG
ACTGGACTGGGACAAAATAAAAAGGAGTCTAGATCCAATGCAGCAAAATTAGCTCTTGATGAGCTTCTAC
AACTGGATGAACCTGAACCACGAATTTTAGAAACATCAGGTCCTCCTCCTTTCCCTGCAGAACCTGTTGT
TTTATCTGAACTAGCATATGTTTCAAAAGTACATTATGAAGGGAGACATATTCAATATGCAAAGATTTCA
CAGATCGTTAAAGAAAGATTTAATCAACTAATTTCTAATCGTTCAGAATACCTGAAATATAGCAGTTCAT
TGGCTGCTTTTATAATTGAAAGAGCTGGACAACATGAGGTTGTAGCTATAGGCACAGGTGAATACAATTA
CAGCCAGGACATTAAGCCAGATGGAAGAGTATTGCATGACACTCATGCTGTTGTTACAGCAAGAAGGTCT
CTTCTTAGGTACTTTTATAGACAACTTCTGCTCTTCTACAGCAAAAATCCTGCTATGATGGAAAAATCAA
TATTTTGTACAGAACCAACTTCTAATCTACTCACTCTTAAACAGAATATCAACATTTGCCTTTACATGAA
CCAGTTGCCTAAAGGATCAGCCCAGATTAAGTCACAGTTACGTCTTAATCCACATTCTATATCTGCATTT
GAAGCCAATGAAGAACTCTGTCTCCACGTGGCTGTTGAAGGCAAAATTTATCTGACTGTTTACTGTCCTA
AAGATGGTGTTAATAGAATAAGCAGTATGTCCTCAAGTGACAAATTGACCAGATGGGAAGTGCTTGGTGT
ACAGGGAGCATTGCTGAGTCATTTTATACAGCCAGTTTACATCAGCAGTATACTTATTGGTGATGGGAAT
TGCAGTGATACCAGAGGCTTAGAAATCGCTATAAAGCAACGTGTTGATGATGCACTCACTTCAAAACTTC
CAATGTTTTACTTAGTCAACAGACCTCATATTAGTTTAGTACCCTCTGCATATCCCCTTCAAATGAACTT
GGAATATAAATTTCTGAGTCTGAATTGGGCACAAGGAGATGTTTCTTTGGAGATTGTGGATGGCCTGAGT
GGGAAGATCACTGAAAGTTCCCCATTTAAAAGTGGTATGTCAATGGCAAGTCGGCTTTGTAAGGCTGCAA
TGTTAAGTCGGTTTAACCTGCTTGCCAAAGAAGCTAAAAAAGAATTACTTGAAGCTGGTACATATCATGC
AGCTAAGTGTATGTCTGCCTCCTATCAAGAAGCTAAATGTAAGTTGAAATCCTACTTACAACAACATGGC
TATGGATCCTGGATTGTGAAATCTCCCTGCATAGAGCAATTTAACATGTGA

Translation (576 aa):
MASNNHWFQSSQVPSFAQMLKKNLPVQPATKTITTPTGWSSESYGLSKMASKVTQVTGNFPEPLLSKNLS
SISNPVLPPKKIPKEFIMKYKRGEINPVSALHQFAQMQRVQLDLKETVTTGNVMGPYFAFCAVVDGIQYK
TGLGQNKKESRSNAAKLALDELLQLDEPEPRILETSGPPPFPAEPVVLSELAYVSKVHYEGRHIQYAKIS
QIVKERFNQLISNRSEYLKYSSSLAAFIIERAGQHEVVAIGTGEYNYSQDIKPDGRVLHDTHAVVTARRS
LLRYFYRQLLLFYSKNPAMMEKSIFCTEPTSNLLTLKQNINICLYMNQLPKGSAQIKSQLRLNPHSISAF
EANEELCLHVAVEGKIYLTVYCPKDGVNRISSMSSSDKLTRWEVLGVQGALLSHFIQPVYISSILIGDGN
CSDTRGLEIAIKQRVDDALTSKLPMFYLVNRPHISLVPSAYPLQMNLEYKFLSLNWAQGDVSLEIVDGLS
GKITESSPFKSGMSMASRLCKAAMLSRFNLLAKEAKKELLEAGTYHAAKCMSASYQEAKCKLKSYLQQHG
YGSWIVKSPCIEQFNM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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