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Report for CCDS32708.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32708.1 Public Homo sapiens 17 LRRC37A3 24 110 108 CCDS HistoryNCBI Gene:374819Re-query CCDS DB by CCDS ID:32708.1Re-query CCDS DB by GeneID:374819See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32708.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000319651.9 ENSP00000325713.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000319651.9Link to Ensembl Protein Viewer:ENSP00000325713.5Re-query CCDS DB by Nucleotide ID:ENST00000319651Re-query CCDS DB by Protein ID:ENSP00000325713
Original member Current member EBI ENST00000584306.6 ENSP00000464535.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000584306.6Link to Ensembl Protein Viewer:ENSP00000464535.1Re-query CCDS DB by Nucleotide ID:ENST00000584306Re-query CCDS DB by Protein ID:ENSP00000464535
Original member Current member NCBI NM_199340.5 NP_955372.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_199340.5Link to Protein Sequence:NP_955372.2Re-query CCDS DB by Nucleotide ID:NM_199340Re-query CCDS DB by Protein ID:NP_955372Link to BLAST:NP_955372.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_955372.2 1634 O60309 1634 100% 0 0

Chromosomal Locations for CCDS 32708.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 64854599 64854644 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 64855840 64855889 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 64858779 64858883 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 64859442 64860973 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 64862900 64863018 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 64868462 64868536 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 64869095 64869166 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 64886086 64886166 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 64886815 64886886 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 64889681 64889752 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 64892529 64892600 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 64894649 64897257 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4905 nt):
ATGACTTCCGCTCAGTGCCCGGCACTAGCGTGTGTCATGTCCCCGCTGCGTTTCTGGGGCCCATGGCCCC
TCCTTATGTGGCAACTATTGTGGCTACTAGTCAAGGAGGCTCAGCCTCTGGAGTGGGTCAAGGACCCGCT
CCAGCTGACCTCTAACCCCCTGGGGCCGCCTGAGCCCTGGTCTTCCCACTCCTCCCATTTCCCACGGGAA
TCTCCCCATGCGCCTACTCTCCCAGCAGACCCGTGGGACTTTGATCACCTGGGGCCCTCTGCTTCCTCAG
AGATGCCAGCCCCACCCCAGGAATCGACTGAAAATTTGGTTCCATTCCTGGACACCTGGGATTCAGCTGG
AGAGCTGCCCCTGGAGCCAGAGCAGTTCTTGGCTTCACAGCAGGATTTAAAGGACAAGCTGAGTCCACAG
GAAAGGCTCCCTGTTTCGCCCAAGAAGCTGAAGAAAGATCCAGCTCAGCGTTGGAGCCTTGCTGAGATTA
TTGGAATTATACACCAATTATCCACACCTCAGAGTCAGAAACAGACTTTGCAGAATGAATATTCCAGTAC
AGATACACCGTATCCCGGTAGCCTGCCTCCAGAACTCCGGGTGAAGTCAGATGAGCCTCCAGGGCCCTCT
GAGCAAGTTGGACCTTCTCAATTCCATCTAGAGCCCGAAACTCAAAATCCAGAGACCCTTGAAGACATCC
AGTCCTCTTCACTCCAGCAAGAAGCCCCAGCACAGCTTCCACAGCTCCTTGAGGAAGAACCTTCTTCAAT
GCAGCAGGAGGCCCCAGCTCTGCCTCCAGAGTCCTCTATGGAGAGTCTAACTCTACCGAATCATGAGGTG
TCAGTTCAACCTCCAGGTGAGGATCAAGCTTATTATCACTTGCCCAACATTACAGTTAAACCTGCAGATG
TGGAGGTTACCATAACTTCAGAGCCTACCAATGAGACAGAATCTTCCCAAGCCCAGCAGGAGACCCCAAT
TCAGTTTCCAGAGGAGGTGGAACCTTCTGCAACCCAACAGGAGGCCCCAATTGAGCCTCCAGTTCCTCCT
ATGGAGCATGAACTTTCCATCAGTGAGCAGCAGCAGCCAGTTCAGCCTTCTGAGTCTTCTAGGGAGGTCG
AATCTTCTCCGACCCAGCAGGAGACCCCAGGTCAGCCTCCAGAACATCATGAAGTCACAGTTTCACCTCC
AGGTCACCATCAAACTCATCATTTAGCTTCACCCAGTGTCTCTGTGAAGCCTCCAGACGTGCAGCTCACC
ATAGCAGCAGAGCCTAGTGCAGAGGTGGGAACTTCTCTAGTCCACCAGGAGGCTACAACTCGGCTCTCAG
GGTCAGGTAATGATGTAGAACCTCCCGCCATCCAGCACGGGGGCCCACCTCTGCTTCCAGAGTCATCAGA
AGAAGCTGGACCTTTAGCAGTTCAACAGGAGACTTCATTTCAATCTCCGGAACCTATTAATAATGAGAAC
CCCTCTCCAACCCAGCAGGAGGCTGCAGCTGAGCATCCACAGACCGCTGAGGAGGGTGAGTCTTCCCTAA
CCCATCAGGAGGCCCCAGCTCAGACTCCAGAGTTCCCTAATGTAGTTGTAGCTCAACCTCCAGAGCATTC
ACACCTGACTCAAGCCACAGTTCAACCTTTGGATCTGGGGTTTACCATCACTCCAGAATCCATGACAGAG
GTTGAACTTTCTCCAACCATGAAGGAGACCCCAACTCAGCCTCCTAAGAAAGTTGTACCCCAACTTCGAG
TATATCAAGGGGTAACAAATCCAACACCAGGTCAGGATCAAGCTCAGCATCCAGTGTCACCCAGCGTTAC
AGTTCAACTTTTGGACCTGGGACTTACCATCACTCCAGAACCCACTACGGAGGTTGGACATTCTACACCC
CCGAAGAGGACTATAGTTTCTCCAAAGCATCCTGAGGTGACACTTCCACATCCAGACCAGGTTCAGACTC
AGCATTCACACCTGACTCGAGCCACAGTTCAACCTTTGGACCTGGGGTTTACCATCACTCCAAAATCCAT
GACAGAGGTTGAACCTTCTACAGCCCTGATGACTACAGCTCCTCCTCCAGGACACCCTGAGGTGACACTT
CCACCTTCAGACAAGGGTCAGGCTCAGCATTCACACCTGACTCAAGCCACCGTTCAACCTCTGGACCTGG
AGCTTACCATAACTACAAAACCTACTACAGAGGTTAAACCATCTCCAACCACGGAGGAGACCTCAACTCA
GCTTCCAGACCTGGGACTTGCCATCATTCCAGAACCCACTACAGAGACTGGACATTCTACAGCCCTGGAG
AAGACTACAGCTCCTCGTCCAGACCGGGTTCAGACTCTGCATCGAAGCCTGACTGAAGTCACAGGTCCAC
CTACTGAACTAGAACCTGCTCAGGATTCACTGGTGCAGTCTGAAAGTTACACCCAAAATAAGGCTTTAAC
TGCACCAGAGGAACACAAGGCCTCCACAAGCACCAACATATGTGAGCTCTGTACCTGCGGAGATGAGATG
TTGTCATGTATTGATCTCAACCCAGAGCAGAGGCTCCGCCAAGTGCCTGTGCCAGAGCCCAACACCCACA
ATGGCACCTTCACCATCTTAAATTTCCAAGGAAACTATATTTCTTACATTGATGGAAATGTATGGAAAGC
ATACAGTTGGACCGAGAAACTAATTCTCAGAGAAAATAACTTGACTGAATTACACAAGGATTCATTTGAA
GGCCTGCTATCCCTCCAGTATTTAGATTTATCCTGCAATAAAATACAGTCTATTGAAAGACATACATTTG
AACCACTACCATTTTTGAAGTTTATAAATCTTAGTTGCAATGTAATTACAGAACTCAGCTTTGGAACATT
TCAGGCCTGGCACGGAATGCAGTTTTTACATAAGTTAATTCTCAATCACAATCCTCTGACAACTGTTGAA
GATCCATATCTCTTTAAATTGCCAGCATTAAAATATCTAGACATGGGAACAACGCTAGTCCCACTTACAA
CACTTAAGAACATTCTCATGATGACTGTTGAACTGGAAAAACTGATCGTACCTAGCCATATGGCCTGCTG
CCTCTGCCAATTTAAAAACAGCATTGAGGCTGTCTGCAAGACAGTCAAGCTGCATTGCAACAGTGCATGT
CTGACAAACACCACACATTGTCCTGAAGAAGCATCTGTAGGGAATCCAGAAGGAGCGTTCATGAAGGTGT
TACAAGCCCGGAAGAATTACACAAGCACTGAGCTGATTATTGAGCCGGAGGAGCCCTCAGACAGCAGTGG
CATCAACTTGTCAGGCTTTGGGAGTGAGCAGCTAGACACCAATGACGAGAGTGATGTTACCAGTACACTA
AGTTACATCTTACCTTATTTCTCAGCCGTTAACCTAGATGTGAAATCACTGTTACTACCGTTCATTAAAC
TGCCAACCACAGGAAACAGCCTGGCAAAGATTCAAACTGTAGGCAAAAACCGGCAGAGACTGAATAGAGT
CCTCATGGGCCCAAGGAGCATCCAGAAAAGGCACTTCAAAGAGGTAGGAAGGCAGAGCATCAGGAGGGAA
CAGGGTGCCCAGGCATCTGTGGAGAACACTGCCGAAGAAAAAAGGCTCGGAAGTCCAGCCCCAAGGGAGC
TGAAACAGCCTCACACACAGCAGGGGCCTGAGAAGTTAGCGGGAAACGCCGTCTACACCAAGCCTTCGTT
CACCCAAGAGCATAAGGCAGCAGTCTCTGTGCTGAAACCCTTCTCCAAGGGCGCGCCTTCTACCTCCAGC
CCTGCAAAAGCCCTACCACAGGTGAGAGACAGATGGAAAGACTTAACCCACGCTATTTCCATTTTAGAAA
GTGCAAAGGCTAGAGTTACAAATATGAAGACATCTAAACCCATCGTACATTCCAGAAAAAAATACCGCTT
TCACAAAACTCGCTCCCGCATGACCCACAGAACACCCAAGGTCAAAAAGAGTCCAAAGGTCAGAAAGAAA
AGTTATCTGAGTAGACTGATGCTCTCAAACAGGCTTCCGTTCTCTGCAGCGAAGAGCCTCATAAATTCCC
CTTCACAAGGGGCTTTTTCATCCTTAAGAGACCTGAGTCCTCAAGAAAATCCTTTTCTGGAAGTATCTGC
TCCTTCAGAACATTTTATAGAAAACAATAATACAAAAGACACAACTGCAAGAAATGCCTTTGAAGAAAAT
GTTTTTATGGAAAACACTAACATGCCAGAAGGAACCATCTCTGAAAACACAAACTACAATCATCCTCCTG
AGGCAGATTCCGCTGGGACTGCATTCAACTTAGGGCCAACTGTTAAACAAACTGAGACAAAATGGGAATA
CAACAACGTGGGCACTGACCTGTCCCCCGAGCCCAAAAGCTTCAATTACCCATTGCTCTCGTCCCCAGGT
GATCAGTTTGAAATTCAGCTAACCCAGCAGCTGCAGTCCGTTATCCCCAACAACAATGTGAGAAGGCTCA
TTGCTCATGTTATCCGGACCTTGAAGATGGACTGCTCTGGGGCCCATGTGCAAGTGACCTGTGCCAAGCT
CGTCTCCAGGACAGGCCACCTGATGAAGCTTCTCAGTGGGCAGCAGGAAGTAAAGGCATCCAAGATAGAA
TGGGATACGGACCAATGGAAGACTGAGAACTACATTAATGAGAGCACAGAAGCCCAGAGTGAACAGAAAG
AGAAGTCGCTTGAGTTCACAAAAGAACTTCCAGGATATGGCTATACCAAAAAACTCATCTTGGCGTTAAT
TGTGACTGGAATACTAACGATTTTGATTATACTTCTCTGCCTCATTGAGATCTGTTGTCACCGAAGGTCA
TTACAAGAAGATGAAGAAGGATTCTCAAGGGACAGCGAAGCCCCAACGGAGGAGGAGAGTGAAGCCCTGC
CATAG

Translation (1634 aa):
MTSAQCPALACVMSPLRFWGPWPLLMWQLLWLLVKEAQPLEWVKDPLQLTSNPLGPPEPWSSHSSHFPRE
SPHAPTLPADPWDFDHLGPSASSEMPAPPQESTENLVPFLDTWDSAGELPLEPEQFLASQQDLKDKLSPQ
ERLPVSPKKLKKDPAQRWSLAEIIGIIHQLSTPQSQKQTLQNEYSSTDTPYPGSLPPELRVKSDEPPGPS
EQVGPSQFHLEPETQNPETLEDIQSSSLQQEAPAQLPQLLEEEPSSMQQEAPALPPESSMESLTLPNHEV
SVQPPGEDQAYYHLPNITVKPADVEVTITSEPTNETESSQAQQETPIQFPEEVEPSATQQEAPIEPPVPP
MEHELSISEQQQPVQPSESSREVESSPTQQETPGQPPEHHEVTVSPPGHHQTHHLASPSVSVKPPDVQLT
IAAEPSAEVGTSLVHQEATTRLSGSGNDVEPPAIQHGGPPLLPESSEEAGPLAVQQETSFQSPEPINNEN
PSPTQQEAAAEHPQTAEEGESSLTHQEAPAQTPEFPNVVVAQPPEHSHLTQATVQPLDLGFTITPESMTE
VELSPTMKETPTQPPKKVVPQLRVYQGVTNPTPGQDQAQHPVSPSVTVQLLDLGLTITPEPTTEVGHSTP
PKRTIVSPKHPEVTLPHPDQVQTQHSHLTRATVQPLDLGFTITPKSMTEVEPSTALMTTAPPPGHPEVTL
PPSDKGQAQHSHLTQATVQPLDLELTITTKPTTEVKPSPTTEETSTQLPDLGLAIIPEPTTETGHSTALE
KTTAPRPDRVQTLHRSLTEVTGPPTELEPAQDSLVQSESYTQNKALTAPEEHKASTSTNICELCTCGDEM
LSCIDLNPEQRLRQVPVPEPNTHNGTFTILNFQGNYISYIDGNVWKAYSWTEKLILRENNLTELHKDSFE
GLLSLQYLDLSCNKIQSIERHTFEPLPFLKFINLSCNVITELSFGTFQAWHGMQFLHKLILNHNPLTTVE
DPYLFKLPALKYLDMGTTLVPLTTLKNILMMTVELEKLIVPSHMACCLCQFKNSIEAVCKTVKLHCNSAC
LTNTTHCPEEASVGNPEGAFMKVLQARKNYTSTELIIEPEEPSDSSGINLSGFGSEQLDTNDESDVTSTL
SYILPYFSAVNLDVKSLLLPFIKLPTTGNSLAKIQTVGKNRQRLNRVLMGPRSIQKRHFKEVGRQSIRRE
QGAQASVENTAEEKRLGSPAPRELKQPHTQQGPEKLAGNAVYTKPSFTQEHKAAVSVLKPFSKGAPSTSS
PAKALPQVRDRWKDLTHAISILESAKARVTNMKTSKPIVHSRKKYRFHKTRSRMTHRTPKVKKSPKVRKK
SYLSRLMLSNRLPFSAAKSLINSPSQGAFSSLRDLSPQENPFLEVSAPSEHFIENNNTKDTTARNAFEEN
VFMENTNMPEGTISENTNYNHPPEADSAGTAFNLGPTVKQTETKWEYNNVGTDLSPEPKSFNYPLLSSPG
DQFEIQLTQQLQSVIPNNNVRRLIAHVIRTLKMDCSGAHVQVTCAKLVSRTGHLMKLLSGQQEVKASKIE
WDTDQWKTENYINESTEAQSEQKEKSLEFTKELPGYGYTKKLILALIVTGILTILIILLCLIEICCHRRS
LQEDEEGFSRDSEAPTEEESEALP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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