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Report for CCDS32607.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32607.1 Public Homo sapiens 17 CRLF3 24 110 108 CCDS HistoryNCBI Gene:51379Re-query CCDS DB by CCDS ID:32607.1Re-query CCDS DB by GeneID:51379See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32607.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000324238.7 ENSP00000318804.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000324238.7Link to Ensembl Protein Viewer:ENSP00000318804.6Re-query CCDS DB by Nucleotide ID:ENST00000324238Re-query CCDS DB by Protein ID:ENSP00000318804
Original member Current member NCBI NM_015986.4 NP_057070.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_015986.4Link to Protein Sequence:NP_057070.3Re-query CCDS DB by Nucleotide ID:NM_015986Re-query CCDS DB by Protein ID:NP_057070Link to BLAST:NP_057070.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_057070.3 442 Q8IUI8-1 442 100% 0 0

Chromosomal Locations for CCDS 32607.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 30784187 30784443 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 30785919 30786031 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 30792440 30792572 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 30793450 30793672 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 30796160 30796337 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 30797311 30797398 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 30803901 30804108 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 30824523 30824651 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1329 nt):
ATGAGGGGGGCGATGGAGCTGGAGCCTGAGCTGCTGTTGCAGGAGGCCCGCGAGAACGTGGAGGCAGCGC
AGAGCTACCGGCGGGAGCTGGGTCACCGGCTTGAGGGGCTGCGTGAGGCGCGGAGGCAGATCAAAGAAAG
TGCATCACAGACAAGGGATGTTCTCAAACAGCATTTTAATGATTTAAAGGGAACCCTTGGAAAGCTCCTG
GATGAGCGATTGGTGACCCTTTTGCAAGAGGTGGACACCATTGAACAGGAGACCATTAAACCACTAGATG
ACTGCCAGAAGCTCATAGAACACGGAGTCAACACTGCAGAGGACTTAGTCCGAGAAGGTGAAATCGCCAT
GCTTGGTGGTGTGGGAGAAGAGAATGAGAAACTGTGGAGCTTTACCAAAAAGGCCTCGCACATTCAGTTG
GACAGCTTACCAGAAGTACCTTTACTGGTTGATGTGCCTTGTTTATCTGCTCAGTTGGATGACTCAATTC
TTAACATAGTGAAAGACCACATTTTTAAGCATGGAACAGTAGCATCTCGCCCACCAGTACAGATAGAAGA
ACTAATAGAGAAACCTGGAGGCATCATTGTACGATGGTGTAAGGTGGATGATGACTTTACAGCCCAAGAT
TACAGGCTCCAGTTTCGTAAATGTACTTCAAATCATTTTGAGGATGTATATGTAGGTTCTGAAACTGAAT
TCATAGTATTGCACATAGACCCCAACGTTGATTACCAGTTCAGAGTCTGCGCCCGAGGAGATGGCCGACA
GGAGTGGAGTCCTTGGAGTGTCCCCCAGATAGGTCATTCCACATTGGTGCCTCATGAGTGGACAGCTGGT
TTTGAGGGGTACAGTCTGAGCAGTCGAAGAAATATAGCACTTCGGAACGATTCTGAATCATCGGGTGTTC
TCTACTCCAGAGCTCCGACTTATTTCTGTGGGCAGACATTAACATTCAGAGTTGAAACTGTGGGACAGCC
AGACAGAAGAGATAGCATAGGAGTGTGTGCAGAAAAACAGGATGGATATGACTCTCTGCAGCGGGATCAA
GCTGTGTGCATTAGTACAAATGGTGCAGTTTTTGTCAATGGAAAAGAAATGACAAATCAGTTACCCGCAG
TTACTTCTGGGTCCACTGTCACGTTTGACATTGAAGCCGTGACTCTAGGAACCACCAGTAATAATGAAGG
TGGACACTTCAAGCTTCGAGTAACTATAAGTTCAAATAATAGAGAAGTGGTTTTTGACTGGTTACTTGAT
CAGTCTTGTGGTTCTCTTTACTTTGGATGCTCATTTTTCTATCCTGGATGGAAAGTGTTAGTGTTTTAG

Translation (442 aa):
MRGAMELEPELLLQEARENVEAAQSYRRELGHRLEGLREARRQIKESASQTRDVLKQHFNDLKGTLGKLL
DERLVTLLQEVDTIEQETIKPLDDCQKLIEHGVNTAEDLVREGEIAMLGGVGEENEKLWSFTKKASHIQL
DSLPEVPLLVDVPCLSAQLDDSILNIVKDHIFKHGTVASRPPVQIEELIEKPGGIIVRWCKVDDDFTAQD
YRLQFRKCTSNHFEDVYVGSETEFIVLHIDPNVDYQFRVCARGDGRQEWSPWSVPQIGHSTLVPHEWTAG
FEGYSLSSRRNIALRNDSESSGVLYSRAPTYFCGQTLTFRVETVGQPDRRDSIGVCAEKQDGYDSLQRDQ
AVCISTNGAVFVNGKEMTNQLPAVTSGSTVTFDIEAVTLGTTSNNEGGHFKLRVTISSNNREVVFDWLLD
QSCGSLYFGCSFFYPGWKVLVF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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