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Report for CCDS32310.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32310.1 Public Homo sapiens 15 SAXO2 24 110 108 CCDS HistoryNCBI Gene:283726Re-query CCDS DB by CCDS ID:32310.1Re-query CCDS DB by GeneID:283726See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32310.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000339465.5 ENSP00000340445.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000339465.5Link to Ensembl Protein Viewer:ENSP00000340445.5Re-query CCDS DB by Nucleotide ID:ENST00000339465Re-query CCDS DB by Protein ID:ENSP00000340445
Original member Current member NCBI NM_001008226.2 NP_001008227.1 Accepted alive Link to Nucleotide Sequence:NM_001008226.2Link to Protein Sequence:NP_001008227.1Re-query CCDS DB by Nucleotide ID:NM_001008226Re-query CCDS DB by Protein ID:NP_001008227Link to BLAST:NP_001008227.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001008227.1 398 Q658L1-1 398 100% 0 0

Chromosomal Locations for CCDS 32310.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 82262880 82262932 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82271603 82271802 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82282119 82283062 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1197 nt):
ATGGGAGCCAAGAGTATGAGGAGCTGGTGTCTGTGTCAGATTTGTAGCTGCGGGTCGGATTATTGTCCTT
ATGAAATAGTTAAACAGCCTCGCCATGTGCCAGAAGAATATAAACCAAAACAAGGGAAGATTGATCTTGG
TACTACCTACAAACGGGATTTGAATTCGTATAAAGTGCAGCCTGTGGCAATAGTCCGGCCTTTGGAGAGA
CAAGTTAAAAAAGGAAAATTGGACACTGTCCCAACCTATAAAGACGATTATAGAGCTTGGGACCTTCATA
AAAGTGAACTTTATAAGCCAGAACAAACTTACCACCCGCCTACTGTGAAATTTGGAAATTCAACTACATT
TCAGGATGATTTTGTTCCTCAGGAGATAAAGCCTAGGCAAAGCTTTAAACCCTCCTCTGTGGTCAAACGT
TCTACAGCCCCTTTTAATGGTATTACAAGTCATCGCCTTGATTATATACCTCATCAGCTTGAACTCAAGT
TTGAAAGGCCAAAAGAAGTTTACAAACCAACTGACCAACGCTTTGAGGATCTCACAACTCACCGGTGTGA
CTTTCAGGGTCTCATTGGTGAAACTGCAAAACTCTGCAGACCTGTACACACCAGAGTGACCCAGAATGCT
CTGTTTGAAGGAAGCACTGAATTCCGTGAAAGTTTTCAACCATGGGAAATCCCACCACCTGAGGTCAAGA
AAGTACCAGAGTATGTGCCTCCTACAGGTAGCATGCTGTTAAACAGCACAAGCCATCTTGACTATGTTCC
ATATCAGGCCAACCATGTTGTTCCCATCAGGCCAGTTTCTCAAAAAAGAAGTAACAATTTTCCTTTCCAA
GGAAAAAGCATCATGAAAGAAGATTTTCCAGCATGGGAAAGTTGTCGTCAAGGACTTATTAAGAAGCAGC
AGCAGATTCCCAACCCATCTGGAAAATTTGATGGTTTGAGCACTTTCAGATCTCACTATGTGCCACATGA
ATTGATCCCAACAGAGAGTTGCAAACCTTTAAATATTGCTTTTAAGAGTTCTGTTCCATTTGATGATGTA
ACCATGTACTCTGTAGAGTACACACCGAAAAGACAGGAAATTTGCCCAGCCAGCTATCCCTCTCCTCCAG
GTTATATTTTCGACAATACAAATTCCCAAGGTCATAAATTCTTCCGCAAGATTATTCCTGCAGTGAAGGC
CTTCTAA

Translation (398 aa):
MGAKSMRSWCLCQICSCGSDYCPYEIVKQPRHVPEEYKPKQGKIDLGTTYKRDLNSYKVQPVAIVRPLER
QVKKGKLDTVPTYKDDYRAWDLHKSELYKPEQTYHPPTVKFGNSTTFQDDFVPQEIKPRQSFKPSSVVKR
STAPFNGITSHRLDYIPHQLELKFERPKEVYKPTDQRFEDLTTHRCDFQGLIGETAKLCRPVHTRVTQNA
LFEGSTEFRESFQPWEIPPPEVKKVPEYVPPTGSMLLNSTSHLDYVPYQANHVVPIRPVSQKRSNNFPFQ
GKSIMKEDFPAWESCRQGLIKKQQQIPNPSGKFDGLSTFRSHYVPHELIPTESCKPLNIAFKSSVPFDDV
TMYSVEYTPKRQEICPASYPSPPGYIFDNTNSQGHKFFRKIIPAVKAF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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