NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS31848.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31848.1 Public Homo sapiens 12 EEF1AKMT3 24 110 108 CCDS HistoryNCBI Gene:25895Re-query CCDS DB by CCDS ID:31848.1Re-query CCDS DB by GeneID:25895See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31848.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000333012.5 ENSP00000327425.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000333012.5Link to Ensembl Protein Viewer:ENSP00000327425.5Re-query CCDS DB by Nucleotide ID:ENST00000333012Re-query CCDS DB by Protein ID:ENSP00000327425
Original member Current member NCBI NM_206914.2 NP_996797.1 Accepted alive Link to Nucleotide Sequence:NM_206914.2Link to Protein Sequence:NP_996797.1Re-query CCDS DB by Nucleotide ID:NM_206914Re-query CCDS DB by Protein ID:NP_996797Link to BLAST:NP_996797.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_996797.1 149 Q96AZ1-2 149 100% 0 0

Chromosomal Locations for CCDS 31848.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 57772725 57772901 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 57773017 57773128 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 57774629 57774767 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 57780255 57780276 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (450 nt):
ATGGCGGACCCCGGCCCAGATCCCGAATCTGAGTCGGAATCGGTGTTCCCGCGGGAGGTCGGGCTCTTTG
CAGACTCTTACTCGGAGAAGAGCCAGTTCTGTTTCTGTGGGCATGTGCTGACCATCACGCAGAACTTTGG
GTCCCGCCTCGGGGTGGCGGCGCGCGTGTGGGACGCGGCCCTGAGCCTGTGCAATTATTTCGAGAGTCAA
AATGTGGATTTCCGAGGCAAGAAGGTGATCGAACTGGGTGCGGGGACAGGCATCGTGGGGATCTTGGCAG
CGCTGCAGGGAGCTTATGGTCTAGTGAGGGAGACAGAGGACGATGTCATAGAACAAGAACTCTGGCGAGG
TATGCGTGGAGCCTGTGGACATGCTCTATCCATGTCTACCATGACTCCCTGGGAATCCATCAAGGGAAGC
TCTGTCAGGGGGGGATGTTACCATCACTGA

Translation (149 aa):
MADPGPDPESESESVFPREVGLFADSYSEKSQFCFCGHVLTITQNFGSRLGVAARVWDAALSLCNYFESQ
NVDFRGKKVIELGAGTGIVGILAALQGAYGLVRETEDDVIEQELWRGMRGACGHALSMSTMTPWESIKGS
SVRGGCYHH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH