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Report for CCDS31415.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31415.1 Public Homo sapiens 11 OR10A2 24 110 108 CCDS HistoryNCBI Gene:341276Re-query CCDS DB by CCDS ID:31415.1Re-query CCDS DB by GeneID:341276See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31415.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000641461.1 ENSP00000493131.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000641461.1Link to Ensembl Protein Viewer:ENSP00000493131.1Re-query CCDS DB by Nucleotide ID:ENST00000641461Re-query CCDS DB by Protein ID:ENSP00000493131
Original member Current member NCBI NM_001004460.2 NP_001004460.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001004460.2Link to Protein Sequence:NP_001004460.1Re-query CCDS DB by Nucleotide ID:NM_001004460Re-query CCDS DB by Protein ID:NP_001004460Link to BLAST:NP_001004460.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001004460.1 303 Q9H208 303 100% 0 0

Chromosomal Locations for CCDS 31415.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 6869755 6870666 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (912 nt):
ATGAGCTTCTCTTCCCTGCCTACTGAAATACAGTCATTACTCTTTCTGACATTTCTAACCATCTACCTGG
TCACCCTGATGGGAAACTGCCTCATCATTCTGGTTACCCTAGCTGACCCCATGCTACACAGCCCCATGTA
CTTCTTCCTCAGAAACTTATCTTTCCTGGAGATTGGCTTCAACCTAGTCATTGTGCCCAAAATGCTGGGG
ACCCTGCTTGCCCAGGACACAACCATCTCCTTCCTTGGCTGTGCCACTCAGATGTATTTCTTCTTCTTCT
TTGGAGTGGCTGAATGCTTCCTCCTGGCTACCATGGCATATGACCGCTATGTGGCCATCTGCAGTCCCTT
GCACTACCCAGTCATCATGAACCAAAGGACTCGTGCCAAACTGGCTGCTGCCTCCTGGTTCCCAGGCTTT
CCTGTAGCTACTGTGCAGACCACATGGCTCTTCAGTTTTCCATTCTGTGGCACCAACAAGGTGAACCACT
TCTTCTGTGACAGCCCACCTGTGCTGAGGCTGGTCTGTGCAGACACAGCACTCTTTGAGATCTACGCCAT
CGTCGGAACCATTCTGGTGGTCATGATCCCCTGCTTGCTGATCTTGTGTTCCTATACTCACATTGCTGCT
GCCATCCTCAAGATCCCATCAGCTAAAGGGAAGAATAAAGCCTTTTCTACATGTTCCTCACACCTCCTTG
TTGTCTCTCTTTTCTATATATCATTAAGCCTCACCTACTTCCGGCCTAAATCAAATAATTCACCTGAGGG
CAAGAAGCTGCTATCATTGTCCTACACTGTTATGACTCCCATGTTGAACCCCATTATCTACAGCCTGAGA
AATAACGAGGTGAAGAATGCCCTCAGCAGGACGGTCTCTAAGGCCCTAGCCCTCAGAAACTGTATCCCAT
AG

Translation (303 aa):
MSFSSLPTEIQSLLFLTFLTIYLVTLMGNCLIILVTLADPMLHSPMYFFLRNLSFLEIGFNLVIVPKMLG
TLLAQDTTISFLGCATQMYFFFFFGVAECFLLATMAYDRYVAICSPLHYPVIMNQRTRAKLAAASWFPGF
PVATVQTTWLFSFPFCGTNKVNHFFCDSPPVLRLVCADTALFEIYAIVGTILVVMIPCLLILCSYTHIAA
AILKIPSAKGKNKAFSTCSSHLLVVSLFYISLSLTYFRPKSNNSPEGKKLLSLSYTVMTPMLNPIIYSLR
NNEVKNALSRTVSKALALRNCIP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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