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Report for CCDS2937.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
2937.1 Public Homo sapiens 3 TMEM45A 24 110 108 CCDS HistoryNCBI Gene:55076Re-query CCDS DB by CCDS ID:2937.1Re-query CCDS DB by GeneID:55076See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 2937.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000323523.8 ENSP00000319009.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000323523.8Link to Ensembl Protein Viewer:ENSP00000319009.4Re-query CCDS DB by Nucleotide ID:ENST00000323523Re-query CCDS DB by Protein ID:ENSP00000319009
Original member Current member NCBI NM_018004.3 NP_060474.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_018004.3Link to Protein Sequence:NP_060474.1Re-query CCDS DB by Nucleotide ID:NM_018004Re-query CCDS DB by Protein ID:NP_060474Link to BLAST:NP_060474.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_060474.1 275 Q9NWC5 275 100% 0 0

Chromosomal Locations for CCDS 2937.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 100555212 100555401 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 100556760 100556972 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 100558405 100558589 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 100568822 100568967 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 100576925 100577018 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (828 nt):
ATGGGGAATTTCAGAGGTCATGCCCTCCCTGGAACCTTCTTTTTTATTATTGGTCTTTGGTGGTGTACAA
AGAGTATTCTGAAGTATATCTGCAAAAAGCAAAAGCGAACCTGCTATCTTGGTTCCAAAACATTATTCTA
TCGATTGGAAATTTTGGAGGGAATTACAATAGTTGGCATGGCTTTAACTGGCATGGCTGGGGAGCAGTTT
ATTCCTGGAGGGCCCCATCTGATGTTATATGACTATAAACAAGGTCACTGGAATCAACTCCTGGGCTGGC
ATCATTTCACCATGTATTTCTTCTTTGGGCTGTTGGGTGTGGCAGATATCTTATGTTTCACCATCAGTTC
ACTTCCTGTGTCCTTAACCAAGTTAATGTTGTCAAATGCCTTATTTGTGGAGGCCTTTATCTTCTACAAC
CACACTCATGGCCGGGAAATGCTGGACATCTTTGTGCACCAGCTGCTGGTTTTGGTCGTCTTTCTGACAG
GCCTCGTTGCCTTCCTAGAGTTCCTTGTTCGGAACAATGTACTTCTGGAGCTATTGCGGTCAAGTCTCAT
TCTGCTTCAGGGGAGCTGGTTCTTTCAGATTGGATTTGTCCTGTATCCCCCCAGTGGAGGTCCTGCATGG
GATCTGATGGATCATGAAAATATTTTGTTTCTCACCATATGCTTTTGTTGGCATTATGCAGTAACCATTG
TCATCGTTGGAATGAATTATGCTTTCATTACCTGGTTGGTTAAATCTAGACTTAAGAGGCTCTGCTCCTC
AGAAGTTGGACTTCTGAAAAATGCTGAACGAGAACAAGAATCAGAAGAAGAAATGTGA

Translation (275 aa):
MGNFRGHALPGTFFFIIGLWWCTKSILKYICKKQKRTCYLGSKTLFYRLEILEGITIVGMALTGMAGEQF
IPGGPHLMLYDYKQGHWNQLLGWHHFTMYFFFGLLGVADILCFTISSLPVSLTKLMLSNALFVEAFIFYN
HTHGREMLDIFVHQLLVLVVFLTGLVAFLEFLVRNNVLLELLRSSLILLQGSWFFQIGFVLYPPSGGPAW
DLMDHENILFLTICFCWHYAVTIVIVGMNYAFITWLVKSRLKRLCSSEVGLLKNAEREQESEEEM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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